Conserved Protein Domain Family
PDZ_1

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pfam12812: PDZ_1 
PDZ-like domain
PDZ domains are found in diverse signalling proteins in bacteria, yeasts, plants, insects and vertebrates. this is a family of PDZ-like domains from bacteria, plants and fungi.
Statistics
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PSSM-Id: 372324
Aligned: 28 rows
Threshold Bit Score: 80.0157
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6BZQ9        360 SITPDRYVEVCGASFQDLSYQLARIYAIPVR--GVYVSEVGGSFRLDGQgnESKGWVVDSIDDIDTPDLDTFIKVIAAIP 437  Yarrowia lipo...
Q6CHS4        371 ALSCTEFVKFGGMTFHNMTYQLVRSTNEPID--GVIVACGGPTD-------VNCRSKLYKINGKKISNLTELKEFFKNA- 440  Yarrowia lipo...
EEQ39815      134 SMNTSRVVFWCGALLQE-PHQSVRQLMEKIPseVYVARKSAGGPMTQYG--ISNSVFITHVNDQETPDLETFVKITNDIP 210 
Q6CIT6        861 ETT--RIVVFAGCVLQA-PHHAVRQVKTSIPseVYAVSRGTSSLALQYG--IEVTNFITHVNDQSTPDLDTFLKVVKEIP 935  Kluyveromyces...
Q7MWL5        398 vITGESTGNVLGASFKDLSAEQMRSYGVSYG--VEVTSVSSGKFKDAG---IKKGFIILSINRQPVSSGADVSDIVReag 472  Porphyromonas...
XP_002147113  337 AIVPTRILNDSGASFHNVPYRTAVCWKVPLK--GMFLASSAINFSLGD---ESNSYIISSINNHPTRNVIEGEKVLSKLK 411 
XP_002506076  349 DVTPSRFLEVCGGVVHALSYQQARNFQLPVG--SVYVAEPGYVLGLAG---LSKHAIITSLNNVPTPDLDAFANAYARL- 422 
XP_003062489  359 AITPSRMLEIAGGVVNALSYQQARNFQLPCG--GVYVAEPGYVLGVAN---VPKHAILTSLGNTPTPDLDAFAAAYAKL- 432 
O74325        393 NVTPSRFLEVGGAVLHDLSYQLARSYQFSLNs-GTYVA-SSGMLNWSS---GTRDFLVTRLANKPTPTLDAFIDVLVQLT 467  Schizosacchar...
XP_002174417  399 SVTPSRFLEVGGTIFHDLSYQLARSYQCAFNs-GTFVA-ASGMLNWSG---GTRDFLVTKLANIPTPNLEALTKVILGLR 473 
Q6BZQ9        438 DG 439  Yarrowia lipolytica CLIB122
Q6CHS4        441 VH 442  Yarrowia lipolytica
EEQ39815      211 DN 212 
Q6CIT6        936 DN 937  Kluyveromyces lactis NRRL Y-1140
Q7MWL5        473 qs 474  Porphyromonas gingivalis
XP_002147113  412 DR 413 
XP_002506076  423 EE 424 
XP_003062489  433 KE 434 
O74325        468 DN 469  Schizosaccharomyces pombe 972h-
XP_002174417  474 DN 475 
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