Conserved Protein Domain Family
F-box_4

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pfam15966: F-box_4 (this model, PSSM-Id:374259 is obsolete and has been replaced by 464958)
F-box
Statistics
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PSSM-Id: 374259
Aligned: 37 rows
Threshold Bit Score: 133.874
Created: 26-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDS30000      134 LDLLPLEVIKKIVDMLDEVSLMNLFRVSPSLGEVCRRTLPTRGIVSPMWQRYKRALGVRGWRIKGFV---WSLPRCGEPV 210  Hymenolepis m...
XP_015786361  441 LLSLPYEILRQICSLLDGFSLNNLSMTCSRMREICSSLLEKRGVVILQWERRVSKDSTLHWVVGSKK---WAFSTNFTEI 517  two-spotted s...
EDV28748      486 MLDLPDEVIERILLLLDSYSMYNLSLTCWQMREMCSLLLVKKGTVAIEWEKAQNCK----WQIARKI---WKYSTACSQT 558  Trichoplax ad...
CDS37859      311 LDRLPHQVLKRIIDMLDEMSLVSLSQVSKQLADVCRRSLPSRGIVAPVWQRELRAG----WRISGFV---WSLPTCGEPV 383  Echinococcus ...
EDO39611      441 LCLLPVEILQTIAGMLDGFGLCNLSRTCKLLREVCRSILEKKGIVMFEWEKRIHDNGEWSWQVRQRK---WFFSTSFTPI 517  starlet sea a...
19_pfamImport   3 LTQMPFEVLQHVARFLDSFSLCNLAMTSRLLRDVCCSLLEERGIVVQQWERQLVGR-KSCWRIAYQR---WFFSTAFTPV 78  
EEN50340      549 LSTLPFEILQHIALCLDSFSLCNFSMVSKLTREVCYSILEDRGIVVQQWEKRRYKT-LFTWQISHQVgrcWAYSYDICLL 627  Florida lancelet
XP_019204663  606 FSSLPFEVLQHIASFLDSFSLCQLSRVSRIMRDVCASLLQMRGMVVLLWEKKRRADGSPSWQITNKV---WRFSTAFGTV 682  Nile tilapia
NP_956726     699 LSGLPFEVLQHVARFLDGFSLCQLSMVSRTMRDVCASLLQSRGMVVVQWEKKQCLDGRRTWQIKDKV---WRFSTAFSPV 775  zebrafish
XP_003204143  624 LSSLPFEVLQHIASFLDGFSLCQLSRVSRLMRDVCGSLLQARGMVILLWEKRKYPDGSSSWQIKEKV---WRFSTAFCTV 700  turkey
CDS30000      211 -HHWRITDFpaplgTQLTLHLKNdCAFYEALRA-HQPFCL 248  Hymenolepis microstoma
XP_015786361  518 -KNWYFDEK-----HDVLNHIRH-CPHNEIIQR-TEPIAL 549  two-spotted spider mite
EDV28748      559 -SGWKIDDT-----SIIARHLQT-CPYYVKQIYpDKRVML 591  Trichoplax adhaerens
CDS37859      384 -RRWQITDSpaplgTQMTRHLHSeCAFYEVLRA-QQPFCL 421  Echinococcus multilocularis
EDO39611      518 -KSWVHSNT-----PTMTAHLEK-CSFYDRHVH-HKQFRy 549  starlet sea anemone
19_pfamImport  79 -VWWGFEEK-----ENMSNHLQK-CSYFQRNLK-SDPY-- 108 
EEN50340      628 cDSWYYEDS-----PSMAEHLRN-CPYNIRHIR-TEPYPv 660  Florida lancelet
XP_019204663  683 -NEWKFANI-----ASMADHLKK-CKFNTIARR-EEAIPL 714  Nile tilapia
NP_956726     776 -NRWEFADI-----SSMADHLKR-CPYNEVLRQ-VEAVPL 807  zebrafish
XP_003204143  701 -NEWKFADI-----VSMADHLKK-CSYNAVERR-EEAVPL 732  turkey
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