Conserved Protein Domain Family
SAP130_C

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pfam16014: SAP130_C (this model, PSSM-Id:374297 is obsolete and has been replaced by 464973)
Histone deacetylase complex subunit SAP130 C-terminus
Statistics
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PSSM-Id: 374297
Aligned: 7 rows
Threshold Bit Score: 601.173
Created: 24-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001092247  651 TLVSSPRPSILRKKPVTEG-AVRKCLIQAQpSEPNAGRVDSGIRL-SGSPRPAGVKPKPDIHVAMAPPVMAAVEALVGHV 728  zebrafish
XP_019207586  634 TLVSSPRPSILRKKPANET-CVRKNLIPAQ-TEASTGRIDSGVRG-AGSPRPAGVKPKAEVHMAVAPPVMATVEALPSQG 710  Nile tilapia
XP_005165953  650 TLVSSPRPSILRKKPVTEG-AVRKCLIQAQpSEPNAGRVDSGIRL-SGSPRPAGVKPKPDIHVAMAPPVMAAVEALVGHV 727  zebrafish
XP_007494039  634 AQGSSPRPSILRKKPATDGmAVRKSLIPPQpPEVTSPRVESSIRStSGSPRPSGAKPKPEIHVSMATPVTVSVEAVSNQS 713  gray short-ta...
OCA35428      639 AQGSSPRPSILRKKPATDGlSVRKSLIPPHpGDAVSPRQDSSLRStSASPRPAGAKPKADLHVPVAPGVTGDPGA----- 713  tropical claw...
XP_014341156  628 AQGSSPRPSILRKKPATDGlAVRKSLIPPQpSEATSPRLDSAMRNtSGSPRPAGAKPKPDIHVSVMPQVTVAVEAVPNQN 707  coelacanth
XP_007245136  632 TLVSSPRPSILRKKPAGEGaGVRKNLIPAQlGDP--GRMDVGIRGtSGSPRPAGVKPKPDILVGLAPPVNPAVEALTGQN 709  Mexican tetra
NP_001092247  729 GEQQTLST---PVQhhsQAIPTLLAPPApaPPSQPTA--VLSALPATMAVTPPVPASMANAVASPTQPAASS-----TAA 798  zebrafish
XP_019207586  711 GEQQVVSS---NTQhltQAIPTMLATPGpvPPSQPST--VLSSLPAAMAVTPPVPASMANTVASPTQPAASSt---pACA 782  Nile tilapia
XP_005165953  728 GEQQTLST---PVQhhsQAIPTLLAPPA--PAPPSQPtaVLSALPATMAVTPPVPASMANAVASPTQPAASSt---aALS 799  zebrafish
XP_007494039  714 SDQPTIAVq-pTSQqppPAIPTIIAAAS--PPSQPSV--ALSTIPGAVPVTPP----ITTIAAAT--PASSTvggslSTV 782  gray short-ta...
OCA35428      714 ADQPNAAAslpSSHhpaAAVPS--------PPSQPAS----GPIPSSIHITPA---TIPALSAPP--PLLSN------AP 770  tropical claw...
XP_014341156  708 SEQPSLTVp-pTSQ---QAIPTIIPPPA--PPSQPPV--TLSTLAASVPLATPTPVCLASVVAPSSQPAASTa---pSMV 776  coelacanth
XP_007245136  710 PDQQQNSAl-pPSQipaQPVSSLLTSAT--PTSQP--------VPAAMAVTPPIP-SMANVVAPPSHPGATSt---aACP 774  Mexican tetra
NP_001092247  799 LSSTLPEVKIKQEAEPMDTSQa-----vPlAPSLTGPAPSLSSQSSTLTVS--SqpGELLPGASPRKKPRKQQHVISTEE 871  zebrafish
XP_019207586  783 TSSVCPDVKIKQEVEAMDTSQ-------PdPNTSMSAAPALTTQTSTLSTP--At-GDLIPGASPRKKPRKQQHVISTEE 852  Nile tilapia
XP_005165953  800 STL--PEVKIKQEAEPMDTSQa-----vPlAPSLTGPAPSLSSQSSTLTVSsqP--GELLPGASPRKKPRKQQHVISTEE 870  zebrafish
XP_007494039  783 MGPAVPEIKIKEEVEPMDIMRpvs--avP-PLTTNTVSPSLALLANNLSMP--P--SDLPPGASPRKKPRKQQHVISTEE 855  gray short-ta...
OCA35428      771 SGAVIPEAKVKEEAEPMDISRpv---svP-PLPPNSISSPLTVLANNISIP--A--GELLPGASPRKKPRKQQHVISTEE 842  tropical claw...
XP_014341156  777 VGSMVPDIKIKQESEAMDTTQsvsvssvP-ALATTAISPAMTPLANRLAPP--P--SELPPGASPRKKPRKQQHVISTEE 851  coelacanth
XP_007245136  775 ISSTLPEIHVKQEAEQMDTSK-------P-------VGPAPPSGTPALAVP--S--ADLTPGASPRKKPRKQQHVISTEE 836  Mexican tetra
NP_001092247  872 TEMVETNSTDEERA-SSRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEK 950  zebrafish
XP_019207586  853 SEMVETNSTDEEKT-PGRPITGRAERRESPPREYVDEEGVRYVPVKPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEK 931  Nile tilapia
XP_005165953  871 TEMVETNSTDEERA-SSRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEK 949  zebrafish
XP_007494039  856 GDMMETNSTDDEKS-TPKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEK 934  gray short-ta...
OCA35428      843 GDMMETNSTDEERChAVKPLTSRPEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEK 922  tropical claw...
XP_014341156  852 GEMMETNSTDDEKF-APKPIVLKAEKQKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRHSDVRVKEEK 930  coelacanth
XP_007245136  837 SEMMEANSTDEERV-LTKPPSQRPEKRKSPPKEYIDEEGVRYVPVRIRPPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEK 915  Mexican tetra
NP_001092247  951 KGSLQDMANQRGVACRAQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVM 1030 zebrafish
XP_019207586  932 KGSLQDMANQRGVACRAQGWKIHLCAAQLRQLSSLEHDVYSRLSTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVM 1011 Nile tilapia
XP_005165953  950 KGSLQDMANQRGVACRAQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVM 1029 zebrafish
XP_007494039  935 KAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTTLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVM 1014 gray short-ta...
OCA35428      923 KLTLQEVANQKGITCRVQGWKTHLCAAQLLQLIKLEQDVFERLTVLQEGLIPKKKTATDDDLHRINELIQGNMQRCKLVM 1002 tropical claw...
XP_014341156  931 KMTLQEMANQKGITCRAQGWKVHLCAAQLMQLTNLEHDVYDRLATLQEGLIPKKKAATDDDLHRINELIQGNMQRCKLVM 1010 coelacanth
XP_007245136  916 KGSLQDVANQKGVVCRAQGWKIHLCSAQLQQLTNLEHDAYSRLTTLQEGLVPKKKSGGDDDLHRISELIQGNMQRCKLVM 995  Mexican tetra
NP_001092247 1031 DQVTEARDTMMKVLDHKDRVLKLLN 1055 zebrafish
XP_019207586 1012 DQVTEARDTMMKVLDHKEKVLKLLN 1036 Nile tilapia
XP_005165953 1030 DQVTEARDTMMKVLDHKDRVLKLLN 1054 zebrafish
XP_007494039 1015 DQISEARDSMLKVLDHKERVLKLLN 1039 gray short-tailed opossum
OCA35428     1003 DQITESRDCMLKVLDHKDRVLKLLN 1027 tropical clawed frog
XP_014341156 1011 DQISEARESMMKVLDHKDRVLKLLN 1035 coelacanth
XP_007245136  996 DQITEARESMMKVLDHRERVLKLLN 1020 Mexican tetra
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