6BWF


Conserved Protein Domain Family
TRPM_tetra

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pfam16519: TRPM_tetra (this model, PSSM-Id:374598 is obsolete and has been replaced by 465156)
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Tetramerisation domain of TRPM
TRPM7_tetra is a short anti-parallel coiled-coil tetramerisation domain of the transient receptor potential cation channel subfamily M member proteins 1-8. It is held together by extensive core packing and interstrand polar interactions. Transient receptor potential (TRP) channels comprise a large family of tetrameric cation-selective ion channels that respond to diverse forms of sensory input. The presence of cytoplasmic domains that direct channel assembly appears to be a feature of many voltage-gated ion channel superfamily members.
Statistics
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PSSM-Id: 374598
Aligned: 19 rows
Threshold Bit Score: 75.0269
Created: 25-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6BWF_A         848 EERIRVTFERVEQMSIQIKEVGDRVNYIKRSLQSLDSQIGHLQDLSALTVDTLKTL 903  house mouse
EKC26700      1275 DERIRVINERVENMTMRMDDINQKENSIKLSLQTMDYRMSKLEDVALQTNDTLSVL 1330 Pacific oyster
XP_003245193  1172 EERIKMSLEKTENIQQKVDDINQKENLQNSSVQALEFRLHKIEDLMDQTLSTLGVi 1227 pea aphid
EEB10519      1096 DERIKTTTEKVENMYQKVEDINQKENAQTTSIQSVEFRLRKVEDVAEQILNHLDvv 1151 human body louse
11_pfamImport    1 DERIKQTTDRVENMYQKIEDINHKENSQTASIQALEFRLRKLEELSEQTASTLSVI 56  
EFN73002      1164 EERVKVTTDRVENMYQKIEDIDKKESTQNASLQTVEFRIRKLEELSQQTVAHLGVi 1219 Florida carpenter ant
XP_008254529  1234 DERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERL 1289 rabbit
XP_023423228  1178 DERIRVTCERVENMSMRLEEINERENFMKTSLQTVDLRLSQLEELSGRMVNALENL 1233 domestic guinea pig
XP_028286263  1227 dERIKVTSERVENMFMRLEEVNERENTMKASLQTVDLRLAQLEEIHGRMAVALEKL 1282 Indian glassy fish
XP_021208485  1217 EERVRNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRLRKLEDIAEQTMSHLAVi 1272 domestic silkworm
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