3G5B


Conserved Protein Domain Family
UPA

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pfam17217: UPA (this model, PSSM-Id:375055 is obsolete and has been replaced by 465384)
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UPA domain
The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.
Statistics
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PSSM-Id: 375055
Aligned: 19 rows
Threshold Bit Score: 204.109
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3G5B_A        151 AVKRLQLAIF-APALC---TSLEYSLRVYCLEDTPAALKEVLELERTLGGYLV-EEPKPLLFKDS---YHNLRLSLHDIP 222  Norway rat
6_pfamImport    1 AAKRLRLVLF-APTAC---TSLEYHIRVYCLNDTQDVLKVAISLEDSRWHFLVlPTPRPVLVTRPgkgLEVLGTSLKNPP 76  
KDR22415      687 AVKTLRLAVF-APSPIlhpQSLDYNVRVYTLEDNMAALEGVLQMEKKLGGCLM-DKPKTMLFQDG---GASLCLSMEDIG 761  Zootermopsis ...
ESO83456      619 AIKILRLAAF-APAAP---PAMDYSIRVYVVEDTHDGLEGVIQMEKKLGGRLL-DKPKQIPFQDC---GNNLCLSIEELS 690  owl limpet
XP_016284328  244 AVKQLKVAVF-GCMSC---NSLDYNLRVYCVDNTPCAFQEVVSDERHQGGQLL-EEPKLLHFKGN---TFSLQISVLDIP 315  gray short-ta...
XP_009078496  246 ASKRLKLVLF-APAAC---PSLEYNIRVYCLSDTQDVLKEVIQLEKQLGGQLI-GAPRVLHFKDS---YHNLRLSIHDMP 317  rifleman
XP_020646532  573 ASKRLKLVLF-APTTC---TGLEYDVRVYCLSDTRDALKDVVQIEKQMGGQLI-GAPRILHFKDS---YHNLRLSIHDVP 644  central beard...
XP_014914699  245 AAKRLRLAVFgSPDLS---NSLGFTLRVYCVDDTPYAFQEVVVGERSRGGRLL-EEPKILLFKGN---TFSLQVSIQDVP 317  sailfin molly
XP_022522872  706 AGKRLRLAVF-GNLEA---DALTYSLRVYCVDDTPYAFQEVVWLERGQGGRLL-EEPKTLLFKAN---CFSLQISIQDVP 777  Mexican tetra
ABB59712      635 AIKRLRIAVF-GSMEA---SSLDYSLRVHCVDDTPHAFQGVVTAETCRGGQLL-EEPKTLFFKGN---CLSLQVSIQDIP 706  zebrafish
3G5B_A        223 HAHWRSKLLAKYQEIPFYHVWNGSQKALHCTFTLERHS--LASTEFTCKVCVRQ--VEGEGQIFQLHTTLAE 290  Norway rat
6_pfamImport   77 LASVLERFHSFGQEISFYHIWSGAQPYLQCTFTLERFS--ASTSDLACKIWVWQ--VEGDGQSFNVNFNIAK 144 
KDR22415      762 P-GWKSKPQADYQEIPFHHIWSSSHNHLHCSFTLERTDrlVHTVAFRILACQKG--SHTHRQMFRINTDLQN 830  Zootermopsis nevadensis
ESO83456      691 P-GWRSKLAANYQEIPFRHIWSGNQNNLHCSFSVESID--RIQSNVSCKIQVYQkaVPNNRQVIRISSNIKE 759  owl limpet
XP_016284328  316 PFLWRIKPFTACQEVPFSRVWCSNRQPLHCAFSLERYT--PTTTQLSCKICIRQ--LKGHEQILQVQTSILE 383  gray short-tailed opo...
XP_009078496  318 SSLWKSKLLASYQEIPFYHIWSGLQPFLHCTFTLERLS--TSTCELACKIWVWQ--VEGDGQSFTVNFNIAK 385  rifleman
XP_020646532  645 SSLWKSKLLVSYQEIPFYHLWSGLQPYLHCTFTLERLS--TSTCQLACKIWIWQ--VEGDGQSFNIDFNIAK 712  central bearded dragon
XP_014914699  318 RLLWSIKPFTTCQEFSFSQVWASNRCPLQCAFSLERYS--LSSSQLSCKISVRQ--VTGEEQILQIYTSVVE 385  sailfin molly
XP_022522872  778 QFLWSIKPFTTCQEFGFSQVWGSNQSPLQCAFTLERFS--QATNQLSCKISIRQ--VKGQEQILQVYTTVGE 845  Mexican tetra
ABB59712      707 QFLWSIKPFTTCQEFSFTQVWYSNQQPVHCAFSLQRHS--AATNQLSCKISVRQ--VKGHEQILQVYTSVGE 774  zebrafish
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