5ZX5


Conserved Protein Domain Family
LSDAT_euk

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pfam18139: LSDAT_euk (this model, PSSM-Id:375584 is obsolete and has been replaced by 465665)
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SLOG in TRPM
Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the channel in potentially recognizing a universal nucleotide or nucleotide-derived ligand.
Statistics
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PSSM-Id: 375584
Aligned: 38 rows
Threshold Bit Score: 307.95
Created: 23-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZX5_A        105 AKYVRLSYDTKPEIILQLLLKEW-------QMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVTTGAWILTGGVNT 177  house mouse
EDO47658       34 AKYIRLAHDTDPELVLRLLCGEW-------ALDLPKLLISVTGGAKNFILSPKIKRVLREGLLKAAQTTGAWVITGGTNT 106  starlet sea a...
EKC20555      718 AKYIRLSHNDSVDKCLKLMENHWki----mEPKRPSLCISVIGGAKSFKLDNRMRETFNAGLIKAAKTTNAWLITTGSNV 793  Pacific oyster
EDQ85552       91 APYVRVSLKDDAQDVLKFVQANLyrhfgnrNYPAPSLILSVTGGAQSFDLPPRLRDAIKRGLTKAVASTDAWVVTGGTHS 170  Monosiga brev...
EGD73753       84 APYLRLSVNDNPEDALLFVKGMLtqk-ygeTYDRPSLILSVTGGARNFTLPPRLETAIAKGLRLAAQRTNAWVVTGGTNT 162  Salpingoeca r...
EGD73755      108 APYLRLSVNDDPEDALLFVKAMLaqk-ygeTYDRPSLILSVTGGARNFTLPPRLETAIAKGLRLAAQRTNAWVVTGGTNT 186  Salpingoeca r...
XP_024509050  177 SQYIRLSFDSDCASIIHLLENIW-------QIPPPKLVISIHGGTNNFNLQPKLARIFRNGLIKSASTTGAWIITSGCDD 249  Strongyloides...
VDD91528       34 AQYLRLNVETDPADIMNLFDNVW-------RMPPPKLIITVHGGLSNFDLQPKLARVFRKGLMKAARTTGAWIITSGL-- 104  human pinworm
VDN94084      277 AQYLRLTVESNPADIMDLFESVW-------NVPAPKLIITVHGGMTDFDLQPKLARVFRKGLLKAAKTTGAWIITAGINA 349  Brugia pahangi
XP_024507084  241 ANYIRLSFDSDPADIVKLFANVW-------KIPPPKLIITIHGGMTNFDIQTKLTRVFRKGLLKAARTAGAWIITSGINA 313  Strongyloides...
5ZX5_A        178 GVAKHVGDALKEH-----AS-R--SSRKICTIGIAPWGVIENRNDLV---GRDV-VAPYQTLL-NPLSKL-NVLNNLHSH 243  house mouse
EDO47658      107 GVMRHVGEAVKGHtvmsrGEqLknTAHQVHLIGIASWGIVDHKEMLV---NPKVeVVPYQMTS-SMQSRG-ACLDNNHSH 181  starlet sea a...
EKC20555      794 GVMRAVGNAVSEGqsflwDGdR--ITHTLRLIGIGPWGYVKNRKKLIs-rGDGCfPVHFQTSKvIQHGKP-VPLNPNHTH 869  Pacific oyster
EDQ85552      171 GVMQLTGSIMSDL--------L--RDRFVPVVGVITWGILKDRKEME---QPQYrAKPYVVQD----QMF-KCPDHNHNM 232  Monosiga brev...
EGD73753      163 GVMKLTGQIMEAL-----SKtQ--SHFIPPTIGIATFGVIVGGADLSa-tGSNEpPKRDHLFDiTKKDGFkAPLDPNHNL 234  Salpingoeca r...
EGD73755      187 GVMKLTGQIMEAL-----SKtQ--SHFIPPTIGIATYGVIIGGDDMTrgePPKI-GLEYEMHK-KDPPKT-TPLDDNHNL 256  Salpingoeca r...
XP_024509050  250 GVTKHVAAAIENC-----QN-SnrNKTKIISIGIAPWGLLKRREDFI---GKDH-TVLYRKTGnNMKSRF-ITLNNRHSY 318  Strongyloides...
VDD91528      105 ---------FDEA-----SS-SarGRSKIVSIGIAAWGMLKEQADLI---GQVS-WSSSLSEEvYFKGRL-S-LNNRHSH 163  human pinworm
VDN94084      350 GVVRQVAAAIDGS-----GS-VsrVRSKIVTIGIAPWGLLKKRDNLL---GQDA-VVPYHPHSfSPKGRF-AVLNNRHSY 418  Brugia pahangi
XP_024507084  314 GVVRHVAAALDGG-----ASlVgkGKSKIVTIGVAQWGLLKKRDSLI---GQDC-VVPYHPHSfSTKGKL-QVLNNRHSY 383  Strongyloides...
5ZX5_A        244 FILVDDGTVGKYGAEVRLRRELEKTINQQRIHARIGQGVPVVALIFEGGPNVILTVLEYLQESPPVPVVVCEGTGRAADL 323  house mouse
EDO47658      182 FILVDNGTDGEYGGEISFRASLENLIASKKMAQK-FHGVPVVLLVLEGGPNTIRTVLESVSRCPAVPVVIAEGSGRAADI 260  starlet sea a...
EKC20555      870 FVFVDDGFRNNYKGASEFRALFEQKVSKPTQA--GGLGIPVVLVIVEGGTDAINDAMVSLNH--NIPVVVCSGTGRAADI 945  Pacific oyster
EDQ85552      233 FVFVDSG-IDDFGGEIEVRAQFEQAAR-------VEYNAPTITIVIQGGPGTMKTAMESVRA--GNPIVVVDGSGLAADV 302  Monosiga brev...
EGD73753      235 FMLVDDGTT-EFGREITFRAAFEKAAA-------TAFGAPVITIVVQGGPGTLNTALQAVRQ--GTPIVVVDGSGLAADV 304  Salpingoeca r...
EGD73755      257 FLLVDDGSTNKFGKEIKFRAAFENAAG-------QAFAAPVVTIVVQGGPGTLGTALQAVRQ--GTPIVVVDGSGLAADV 327  Salpingoeca r...
XP_024509050  319 FLLTDNGTVGKWGSEIILRRRLETYIKERQTIANKGKTIPVVCVILEGGTFSIRTALQYVTTIPKTPVVVCDGSGRASDM 398  Strongyloides...
VDD91528      164 FLLVDNGTVGRDGADIILRKRLETYIAEKQKIGGGTRSVPVVCVVLEGGTCTIKSVVDYVTSTPLVPVVICDGSGRAADL 243  human pinworm
VDN94084      419 FLLVDNGTIGRYGADVILRKRLESYISEKRTLGNGTRSVPVVCVVLEGGTCTIKAVYDCVCTSPRVPVVVCDGSGRAADL 498  Brugia pahangi
XP_024507084  384 FLLVDNGTVGRYGADIILRRRLESYIAQKQKVGEGNRGVPIVCVVLEGGTCTIRTVLDYVANIPRVPVVVCDGSGRASDL 463  Strongyloides...
5ZX5_A        324 LAYIHKQTEEGGN-LPDAAEP-----DIISTIKKTF-NFGQSEAV------HLFQTMMEC 370  house mouse
EDO47658      261 LAFAHRFIAPSNG-EMSGVADvvehrQLLHKIEKSFaECSPEDRL------SIYQNVLKC 313  starlet sea anemone
EKC20555      946 LAYAYSHIRSSNR-ELKQKREn----KLRDKIRDAY-GGRWNKDEiemnidKHLTNVMEC 999  Pacific oyster
EDQ85552      303 LAYAYQFLHSGNSrHRSHTVQ-----ELKAIIATQFaHLPGDKQV------DLMHQAFEC 351  Monosiga brevicollis MX1
EGD73753      305 LAYAYNFMHNPRSrFTSYTIE-----DLKTMVKNTF-NTGDDDAKl----tQLLDKALEC 354  Salpingoeca rosetta
EGD73755      328 LAYAYNFMHNPLTrFKSYTID-----DLRQKVAQTFnPKSSQQLT------NLLDSALEC 376  Salpingoeca rosetta
XP_024509050  399 LSFTHHYIQEDGQ-LPEILKK-----QLLSLIESVF-QLNQIEAE------HLLKDLLAC 445  Strongyloides ratti
VDD91528      244 LAFAHQCVQEDGK-LPENVQR-----QLLSLIESVF-GYDKQNAE------SLLADLTKC 290  human pinworm
VDN94084      499 LAFAHQYVQEDGQ-LPERVKP-----QLFSLVQFVF-GYDDDAAE------KLLEQLMMC 545  Brugia pahangi
XP_024507084  464 IAFAHRFVLDNGQ-LPEGVQP-----QLLHLIQNVF-FYSKPESE------NLLLDLLEC 510  Strongyloides ratti
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