2A0A


Conserved Protein Domain Family
FABP_Der_p_13-like

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cd19614: FABP_Der_p_13-like 
mite group 13 allergens similar to Dermatophagoides farinae Der p 13, and related proteins
The minor house dust mite allergen Der p 13 is a fatty acid-binding protein and an activator of a TLR2-mediated innate immune response. This group also contains other mite group 13 allergens, including Tyrophagus putrescentiae Tyr p 13 and Blomia tropicalis mite blo t 13. blo t 13 binds the natural fluorescent fatty acid cis-parinaric acid and oleic acid by competition, but not retinol, retinoic acid, cholesterol, or dansylated or anthroxylated fatty acids. This subgroup belongs to the intracellular fatty acid-binding protein (FABP) family, members of which are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.
Statistics
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PSSM-Id: 381247
Aligned: 5 rows
Threshold Bit Score: 200.923
Created: 20-Sep-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand binding
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding cavity [chemical binding site]
Evidence:
  • Comment:ligand is bound within the beta-barrel in a central internal water-filled cavity lined with polar and hydrophobic amino acids
  • Comment:based on cytosolic fatty acid-binding protein family members with structure
  • Citation:PMID 7683727

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #           #  ##  #     ##  #    # # #      # # #      # # #       # #        
2A0A_A         3 SIEGKYKLEKSEKFDEFLDKLGvgFMVKTAAKtlKPTFEVAIENDQYIFRSLSTFKNTEAKFKLGEEFEEDRaDGKRVKT 82  American house ...
AAU11502       3 QLNGSYKLEKSDNFDAFLKELGvnFVTRNLAKsaSPTVEVIVDGDSYTIKTSSTLKNSEIKFKLGEEFEEDRaDGKKVQT 82  Tyrophagus putr...
XP_017494562   2 TIEGKYKLEKSENFDAFLDKLGvgFMVKTAAKtlKPTLEVEVAGDTYTLRSLSTFKNTEIKFKLGEEFEEDRaDGKKVKT 81  Rhagoletis zeph...
Q17284         2 PIEGKYKLEKSDNFDKFLDELGvgFMVKTAAKtlKPTLEVDVQGDTYVFRSLSTFKNTEIKFKLGEEFEEDRaDGKRVKT 81  Blomia tropicalis
ABU97480       3 QLNGSYKLEKSDNFDAFLKELGvnFVTRNLAKsaSPTVEVIVDGDSYTIKTSSTLKNSEIKFKLGEEFEEDRaDGKKVQT 82  Tyrophagus putr...
Feature 1                 # #         # #      # # #        # #  
2A0A_A        83 VIQKEGdNKFVQTQFGDKEVKIIREFNGDEVVVTASCDGVTSVRTYKR 130 American house dust mite
AAU11502      83 SVTKEGdNKLVQVQKGDKPVTIVREFSEEGLTVTATVNGVTSVRFYKR 130 Tyrophagus putrescentiae
XP_017494562  82 VVNKEGdNKLVQTQFGDKEVKIIREFNGDDVVVTASVDGVTSVRSYKR 129 Rhagoletis zephyria
Q17284        82 VVNKEGdNKFIQTQYGDKEVKIVRDFQGDDVVVTASVGDVTSVRTYKR 129 Blomia tropicalis
ABU97480      83 SVTKEGdNKLVQVQKGDKPVTIVREFSEEGLTVTATVNGATSVRFYKR 130 Tyrophagus putrescentiae

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