Conserved Protein Domain Family
MltD-like

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cd16894: MltD-like 
Membrane-bound lytic murein transglycosylase D and similar proteins
Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
Statistics
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PSSM-Id: 381615
Aligned: 138 rows
Threshold Bit Score: 123.397
Created: 4-Feb-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative sugarcatalytic
Feature 1:putative sugar binding site [chemical binding site]
Evidence:
  • Comment:Peptidoglycan-binding residues defined by comparison to lytic transglycosylase (LT) and goose egg white lysozyme (GEWL)
  • Citation:PMID 7823320

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         #                 ###  #                           #           
P0AEZ8       109 VKKRNm-PMELVLLPIVESAFDPHATSgANAAGIWQIIPSTGRNYGlkqtrnYDARRDVVASTTAALNMMQRLNKmfDGD 187 Escherichia col...
ACX96401     146 LQANNl-PLELALLPIVESAYRPDAVStSNAAGIWQFVRSTGDHFGlrrtvwYDGRRDIKASTDAAMQYFTRLRVmfNDN 224 Halothiobacillu...
EFY07126      99 LKNRNl-PVELVALPLLESGYNQRARSnAGAKGPWQFIRATGKSYGlktssnYDEFYDFIRSTDASLRYLTHLYNelNHN 177 Succinatimonas ...
ADW18939     172 FTAHRl-PVELAYLPHVESSFNPKAYSkAGAAGLWQFTRSTGKDYMnin-qlVDERYDPYLATQAAARLLKENYAa-LQS 248 Desulfobulbus p...
AGM41341     164 LADAGl-PPELVALPHVESSFNPVARShAGAAGLWQFTVGTGREYMtvn-rvVDERLDPWRSTEAAAALLTQNYEr-LQN 240 Ectothiorhodosp...
WP_021276844 154 FKKRNl-PTELKYLPHVESSFNYQASSkVGAAGIWQFMRSTAKQYKlkvgyvVDERRDPLKSTRAATRFLKDNYRs-LKS 231 Bacteriovorax s...
AFY02841     173 FRDAKv-PVELTRLAFVESSFNIMARSkVGASGLWQIMPYTAKPYKmis-atVDNRNHPMEATKLAAKLLRQNYSm-LNS 249 Bdellovibrio ba...
GAK52533     210 FQQYGl-PTDLTRIPFVESYFNHRAYSyAGAAGIWQFMPATARMYGlrvnakVDERYDPFKSAESAAQLLKANYEl-FGS 287 bacterium UASB14
WP_004075371 177 IIKSYglPEDLAYLPCLESAYNIQTYSkCGAAGLWQFTHYTGKMFMdid-dvVDQRRDPIVSTHGAARLLKKNHDk-LQN 254 Desulfobacter p...
WP_021269688 217 IQRFNv-PKELVAIAFLESSFNIRARSkVGANGVWQFMPYIAKTFMhsd-rnINDSYNVLLSTLSALHLLKQNHKi-LGT 293 Bacteriovorax s...
Feature 1               ##                                                
P0AEZ8       188 WLLTVAAYNSGEGrvmkaiktnka-----rgkstdfwslpLPQETkqYVPKMLALSD 239 Escherichia coli CFT073
ACX96401     225 WPVVIASYNGGEGtlqnaitynqsk----glptdfwdltrISKETadYPARLYALVI 277 Halothiobacillus neapolitanus c2
EFY07126     178 WDLAIAAYNQGEFtikrairnaqks----gvktynmstlkLSKHArlYVRRFHAYAD 230 Succinatimonas hippei YIT 12066
ADW18939     249 WPLAITAYNYGKAgmmralkehgsy----vnifnsydqgyFKFASrnFYAEFVAATR 301 Desulfobulbus propionicus DSM 2032
AGM41341     241 WPIAVTAYNHGRNgmlraikavgdrd--yvrirseytgsrFGFASrnFYPSLLAAAD 295 Ectothiorhodospiraceae bacterium M19-40
WP_021276844 232 WPLALTAYNQGVGnirravravgske--inkivenyngrnFGFASknFYATFMATVN 286 Bacteriovorax sp. DB6_IX
AFY02841     250 WPLAVTGYNHGPTgvrkltekygtre-lgelvtdvkssktFGFASrnFYASFLAALE 305 Bdellovibrio bacteriovorus str. Tiberius
GAK52533     288 WPLAITAYNHGPAgllnaieqldttd--lgeitrkykserFGFFSrnYYAQFLAAAQ 342 bacterium UASB14
WP_004075371 255 WPMAITAYNHGLSgmsrakdkhkty----peiytnyrsrsFGFASrnFYPEFIAARQ 307 Desulfobacter postgatei
WP_021269688 294 WPLAVAAYNSGTKhflkakrqlkdkdakledilkkydhphIGFAAenFYSEFLALAY 350 Bacteriovorax sp. BSW11_IV

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