6UZL,5U1D,6S7P,4M1M,4F4C,4F4C,6FN1,4M1M,4MYH,6PZI,6PZI


Conserved Protein Domain Family
ABC_membrane

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pfam00664: ABC_membrane (this model, PSSM-Id:395537 is obsolete and has been replaced by 459896)
Click on image for an interactive view with Cn3D
ABC transporter transmembrane region
This family represents a unit of six transmembrane helices. Many members of the ABC transporter family (pfam00005) have two such regions.
Statistics
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PSSM-Id: 395537
Aligned: 70 rows
Threshold Bit Score: 129.686
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6UZL_B   48 LIVAGVALILNAASDTFMLSLLKPLLDDGFGK----TDRSV----------------LVWMPLVVIGLMILRGITSYVSS 107  Escherichia coli
P47261    9 LLYVFLCIVLGILYGIANPILLAQGLGFIFPItssnGRAVDsiysliyptnlnvfirLTIVSVTVFVAYALIFVFNVAQN 88   Mycoplasma genitali...
P9WQJ1   17 VAMLMMLQLVSTLASLYLPTVNAAIVDDGVAK----GDTAT----------------IVRLGAVMLGVTGLQVLCAIGAV 76   Mycobacterium tuber...
P26363   82 FLFYGILLYLGEVTKAVQPLLLGRIIASYDRD----NEHER----------------SIAYYLAIGLCLLFVVRMLLLHP 141  African clawed frog
P26362   82 FLFYGILLYFVEFTKAVQPLCLGRIIASYNAK----NTYER----------------EIAYYLALGLCLLFVVRTLFLHP 141  spiny dogfish
6PZI_G  318 LCIFGIVDHLGKENHVFQPK--TQFLGVYFV-----SSQEFl---------------GNAYVLAVLLFLALLLQRTFLQA 375  black-bellied hamster
P33527  325 FLMSFFFKAIHDLMMFSGPQILKLLIKFVNDT----KAPDW----------------QGYFYTVLLFVTACLQTLVLHQY 384  human
Q10185  268 TVVIIVLKLVQDVVAFIQPNLIRKIVIFVSSY----SSEHPqp-------------pQVGFSLAIAMFLTNVVQTALLQQ 330  Schizosaccharomyces...
P39109  287 MLLAAFFKAIHDVLAFTQPQLLRILIKFVTDYnserQDDHSslqgfenn-hpqklpiVRGFLIAFAMFLVGFTQTSVLHQ 365  Saccharomyces cerev...
P21441  231 VWAQILPKLLSDVTALMLPVLLEYFVKYLNADn---ATWGW----------------GLGLALTIFLTNVIQSCSAHKYD 291  Leishmania tarentolae
6UZL_B  108 YCI--SW-VSGKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMF 182  Escherichia coli
P47261   89 YVG--IK-LYQQTCATLRWKAYLKMQSMSTSFFDT--QNNGDLMSRLTNDMYNIDNLFTQAGGQAIQSLFNILTTSVLIF 163  Mycoplasma genitali...
P9WQJ1   77 YLG--SR-TGAGFGRDLRSAMFEHIITFSERETAR--FGAPTLLTRSTNDVRQILFLVQMTATVLVTAPIMCVGGIIMAI 151  Mycobacterium tuber...
P26363  142 AIFglHH-IGMQMRIAMFSLIYKKTLKLSSKVLDK--ISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVLL-LMGLLW 217  African clawed frog
P26362  142 AVFglQH-LGMQMRIALFSLIYKKILKMSSRVLDK--IDTGQLVSLLSNNLNKFDEGVAVAHFVWIAPVQVVL-LMGLIW 217  spiny dogfish
6PZI_G  376 SYYvaIE-TGINLRGAIQTKIYNKIMHMSTSNLSMgeMTAGQICNLVAIDTNQLMWFFFLCPNLWTMPVQIIVGVILLYY 454  black-bellied hamster
P33527  385 FHI--CFvSGMRIKTAVIGAVYRKALVITNSARKS--STVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWL 460  human
Q10185  331 YFQlgMV-LGMRWRSELITAIYRKSLRLSSAARQS--RSVGDIVNYMSVDTQKVCDLTMFLFVIVSGPFQIVLALTNLYH 407  Schizosaccharomyces...
P39109  366 YFLnvFN-TGMYIKSALTALIYQKSLVLSNEASGL--SSTGDIVNLMSVDVQKLQDLTQWLNLIWSGPFQIIICLYSLYK 442  Saccharomyces cerev...
P21441  292 HIS--IR-TAALFETSSMALLFEKCFTVSRRSLQRpdMSVGRIMNMVGNDVDNIGSLNWYVMYFWSAPLQLVLCLLLLIR 368  Leishmania tarentolae
6UZL_B  183 YYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQG 262  Escherichia coli
P47261  164 LLSPVIALISLSILATLITFSFAFLKKSKTSYSQVQNNLGDMSGYIEEVLTNHKVVHVLKLQEIMIKDFDQYNKSMIKPT 243  Mycoplasma genitali...
P9WQJ1  152 HQEAALTWLLLVSVPILAVANYWIISHMLPLFRRMQSLIDGINRVMRDQLSGVRVVRAFTREGYERDKFAQANTALSNAA 231  Mycobacterium tuber...
P26363  218 DLLQASAFCGLGFLIILSLFQARLGRMMMKYKDKRAGKINERLVITSQIIENIQSVKAYCWENAMEKIIETIRETELKLT 297  African clawed frog
P26362  218 NELTEFVFCGLGFLIMLALFQAWLGKKMMQYRDKRAGKINERLAITSEIIDNIQSVKVYCWEDAMEKIIDDIRQVELKLT 297  spiny dogfish
6PZI_G  455 ILGVS-ALIGAAVIILLAPVQYFVATKLSQAQRTTLEHSNERLKQTNEMLRGMKLLKLYAWESIFCSRVEVTRRKEMTSL 533  black-bellied hamster
P33527  461 NLGPSV-LAGVAVMVLMVPVNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKV- 538  human
Q10185  408 LVGYG-ALSGAFVTFLLFPCNVVIASIFKRFQNRQMKNKDARSQFMTEIINNIRSIKLYAWENIFLQKLLQLRNTRELRM 486  Schizosaccharomyces...
P39109  443 LLGNSM-WVGVIILVIMMPLNSFLMRIQKKLQKSQMKYKDERTRVISEILNNIKSLKLYAWEKPYREKLEEVRNNKELKN 521  Saccharomyces cerev...
P21441  369 LVGW-LRVPGMAVLFVTLPLQAVISKHVQDVSERMASVVDLRIKRTNELLSGVRIVKFMGWEPVFLARIQDARSRELRCL 447  Leishmania tarentolae
6UZL_B  263 MKMVSASSISDPIIQLIASLALAFVLYAASFPSVM-D---SLTAGTITVVFSSMIALMRPL 319  Escherichia coli
P47261  244 VRGNTYSIFLFSWFGFISNITYLVSISIATAFSVN-S---IPSFGISVINYSFMLSYIASL 300  Mycoplasma genitalium G37
P9WQJ1  232 LSAGNWQALMLPVTTLTINASSVALIWFGGLRIDS-G---QMQVGSLIAFLSYFAQILMAV 288  Mycobacterium tuberculosis H37Rv
P26363  298 RKAAYVRYFNSSAFFFSGFFVVFLS-IVPHLLL---D---GISLRKIFTTISFSIVLRMAV 351  African clawed frog
P26362  298 RKVAYCRYFSSSAFFFSGFFVVFLS-VVPYAFI---H---TIKLRRIFTTISYNIVLRMTV 351  spiny dogfish
6PZI_G  534 RAFAVYTSISIFMNTAIPIAAVLIT-FVGHVSFFKeS---DLSPSVAFASLSLFHILVTPL 590  black-bellied hamster
P33527  539 LKKSAYLSAVGTFTWVCTPFLVALCTFAVYVTIDEnN---ILDAQTAFVSLALFNILRFPL 596  human
Q10185  487 LKKIGIVNTIGNFTWLFAPILVSAATF-GTFIVLY-GktrVLSVDIVFACLSLFNLLQFPL 545  Schizosaccharomyces pombe 972h-
P39109  522 LTKLGCYMAVTSFQFNIVPFLVSCCTFAVFVYTED-R---ALTTDLVFPALTLFNLLSFPL 578  Saccharomyces cerevisiae S288C
P21441  448 RDVHVANVFFMFVNDATPTLVIAVV-FILYHVSGK-----VLKPEVVFPTIALLNTMRVSF 502  Leishmania tarentolae
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