4AKM,5GV0


Conserved Protein Domain Family
Lamp

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pfam01299: Lamp 
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Lysosome-associated membrane glycoprotein (Lamp)
Statistics
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PSSM-Id: 396046
View PSSM: pfam01299
Aligned: 73 rows
Threshold Bit Score: 104.191
Threshold Setting Gi: 340367885
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4AKM_B         2 VKTGIYQVLNGSRLCIKAEMGIQLIVQ-DKESVFSPRRYFNIDPNATQASGNCGTRKSNLLLNFQGGFVNLTFTKD---- 76  human
XP_002943424 252 PTTPDFFANGTSGPCLRMTAVLEITV-----NGTK--QIQVPPPPVTQSDGKCYKDRVELALGFPGATLSLAFAQD---- 320 tropical clawed...
XP_003768813 122 GTVGDYFGANGSQLCVRLRAQIQMRVLyQSHDGEKLWGIFILNPNRTVAQGGCEGNRSSLNLSFPEGKLIFGFKQDs--i 199 Tasmanian devil
XP_006105570 169 AAVGDYTWTNVSLPCVHLQAQIQIRIRyPTQGGKEAWGISVLNPNKTTPQGGCEGAHPHLLLSFPYGQLSFGFKQEp--l 246 little brown bat
XP_016825511  95 EALGNYTWTNGSQPCVQLQAQIQIRILyPTQGGGKAWGITTLNPNKTKVQGGCDHAYPHLSLSFPYGRLTFGFKQDm--e 172 Chinese hamster
Q4FZY1       129 GALGNYTWTNGSQPCVQLQAQIQIRILyLTQGGKKAWGLSVLNPNKTKVQGGCDSAHPHLALSFPYGQLTFGFKQDrhqs 208 Norway rat
ELW63601     153 NAIGDYVWTNGSQPCVHLQAQIQIRVLyPTQGGGKAWGTSVLNPNQTKVQGGCEGAQPHLLLSFPSGHLHFGFQQEa--q 230 Chinese tree shrew
XP_004058553 155 ETIGDYTWTNGSQPCVHLQAQIQIRVMyTTQGGGEAWGISVLNPNKTKVQGSCEGAHPHLLLSFPYGHLSFGFMQDl--q 232 western lowland...
XP_003466301 132 EAVGDYTWTNGSQPCVRLQAQIQIRVLyPTQGGGEAWGISVLNPNKTKVQGGCADAHTHLRLSFPYGHLSFGFKQAvqqs 211 domestic guinea...
Q2KIW2       136 EAIGDYTWSNGSQPCVRLQAQIQIRVLyPTQGGGEAWGISVLNPNRTKAQGGCEGTHSHLLLSFPSGQLSFGFKQDp--l 213 cattle
4AKM_B        77 EESYYISEVGAYLTV---SDPETVYQGIKHAVVMFQTAVGHSFKCVSEqSLQLSAHLQVKTTDVQLQAFDFE 145 human
XP_002943424 321 STNFYLEEVNVTLLD---KESSGMFGA---TVREMEAPLGQSFSCDLV-TLKVTSSLVVTASKVQAQAFQLN 385 tropical clawed frog
XP_003768813 200 MKSVYLSYLATEFNVsfpSAIRWTFSAENSSLQDLQAPLGYSFCCRNR-SIALSPEIHLDLLALQLQAAQLL 270 Tasmanian devil
XP_006105570 247 QSTVYLNSVAVEYNVsfpQATQWTFSVQNSSLRELQAPLGQSFSCRNA-SIILSPAFHLDLLFLKLQAARLP 317 little brown bat
XP_016825511 173 QGTVYLNYMAVEYNVsfpQAAQWTFSAQNSSLRELQAPLGQSFCCRNT-SIVLSPAVHLDLLFLRLQAAQLP 243 Chinese hamster
Q4FZY1       209 HSTVYLNYMAVEYNVsfpQAAQWTFSAQNSSLQELQAPLGQSFCCGNT-SIVLSPAIHLDLLSLRLQAAQLP 279 Norway rat
ELW63601     231 QSTIFLSYMAVEYNVsfpHAAQWTFSAQNSSLRDLQAPLDRSFSCRNA-SITLSPALHLDLLFLRLQAAQLP 301 Chinese tree shrew
XP_004058553 233 QKVVYLSYMAVEYNVsfpHAAQWTFSAQNASLRDLQAPLGQSFSCSNS-SIILSPAVHLNLLSLRLQAAQLP 303 western lowland gorilla
XP_003466301 212 QSVVYLSYMAVDYNVsfpRAAQWAFLAQNSSLRDLQAPLGQSFSCGNA-SILVSRGFHLDLLSLRLQAAQLP 282 domestic guinea pig
Q2KIW2       214 QSAVYLNYMAVEYNVsfpQAVQWTFSVQNSSLRDLQTPLGHSFSCRNA-SIIVSPALHLDLLSLKLQAAQLS 284 cattle
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