4DGW,2E60,2DT7


Conserved Protein Domain Family
Surp

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pfam01805: Surp (this model, PSSM-Id:396395 is obsolete and has been replaced by 460339)
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Surp module
This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding.
Statistics
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PSSM-Id: 396395
Aligned: 321 rows
Threshold Bit Score: 40.1932
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DGW_B          9 EVIKLTARYYAKDK-SIVEQXISK-DGEA-RLNFXnSS-HPLHKTFTDFVAQY 57   Saccharomyces cerevisiae S288C
EKC18023      180 aIIEKTAKFVAKQGaQMEILIKTKqANNP-QFEFL-HFeNPLNLYYKHMVKMI 230  Pacific oyster
EEN61667      208 QIIERTATFISSQGtQMEIVLKAKqHGNS-QFDFL-TFdHYLNPYYKHMVKMI 258  Florida lancelet
XP_026692111  226 AIIEKTAKFVSKQGaQMEIVLKAKqSSNS-QFQFL-QFgHYLNPYYKHIVTRI 276  vase tunicate
Q8MPQ0        169 HIIEKTASFIVANGtQMEIVIKAKqRNNAeQFGFL-EFdHRLNPFYKYLQkli 220  Caenorhabditis elegans
KJE95454      255 EIIEKTARAVAVQGtQLEIVIKTKqRSNP-LFGFL-LFdHPLNPFYKHLLQLI 305  Capsaspora owczarzaki ATCC 30864
XP_002866076  150 QIITRTSSFVSKHGgQSEIVLRVKqGGNP-TFGFL-MPdHHLHPYFRFLVDhq 200  Arabidopsis lyrata subsp. lyrata
XP_004991116  356 HIIEKTAKFVSRGGvQMELLIRTReQNNA-WMRFL-DAdDRLHPLYRHFVAlc 406  Salpingoeca rosetta
XP_020465478  199 NIIERTAKFVSQQGaQFEIVLKAKqSGNS-QFDFL-RFdHYLNPYYKHILRAM 249  swamp eel
2E60_A         29 AIIERTASFVCRQGaQFEIMLKAKqARNS-QFDFL-RFdHYLNPYYKFIQKAm 79   human
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