Conserved Protein Domain Family
Reticulon
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pfam02453: Reticulon (this model, PSSM-Id:396837 is obsolete and has been replaced by 460562)
Reticulon
Reticulon, also know as neuroendocrine-specific protein (NSP), is a protein of unknown function which associates with the endoplasmic reticulum. This family represents the C-terminal domain of the three reticulon isoforms and their homologs.
Links
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Statistics
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PSSM-Id: 396837
Aligned: 213 rows
Threshold Bit Score: 73.2883
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EPB88465     156 VLNILNWKNPVRSGSIFALIVGSIILTRWY-----SLLQIGSSLLTIAIGVNLIYVNFIMQGQKLvSSnqdashpynnvi 230 Mucor circinell...
EFC39794     116 LADILMWRNIFVTVPVFLAIQALFLLLCKYe---fTLVNLIGKVVFIQVLISVGYMVVFKIIQNNpNHt----------- 181 Naegleria gruberi
XP_006852583 157 VVDLIMWKDVSKSSLWFGLGCLCFLSTCYTreiniSSVSVVSNLGLLLLAVSFLFNSFSGIREKK-ND------------ 223 Amborella trich...
EER88893     213 IVELVMWRNVAKSALWFGSGSM-FFSCSFSrdvtfSPISALCHLGVMILGLAFFKNSVPQRPQVE--------------- 276 sorghum
XP_003539539 142 VSDLIMWKNSSKSTFWFGFGSLCLVSSCFTqglnfSIFSALSQLGILLSGVSFFSNSICQRNEVE--------------- 206 soybean
XP_006582310 177 ISDLIMWKDVSKSTLWFGLGCLCFLSSCFTkgvnfSIFSAISRLAILLLGVSFFSNSVCQRNQVE--------------- 241 soybean
EEF44385     191 IYDLIMWKDVAKSSLWFGFGCLCFLSSCFAkgisfSIFSAISQLGLLFLGASFISNSICQRNNVE--------------- 255 castor bean
XP_010656999 185 VTDLIMWKDASKSSFWFGFGSVCFLSSCFTrgisfSIFSAISQLGLLFLGLSFFSNSLYQRDNVE--------------- 249 wine grape
VDC63656     180 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAkglnfSLFSAVSNLGLVLLCGSFLSNTLSQRNKED--------------- 244 field mustard
XP_009129630 186 INDLIMWRDVAKSSLWFGFGCLCFLSSCFAkgfsfSVFSAVSHVGLLYLGVSFLSHSLRQRLTEEt-------------- 251 field mustard

EPB88465     231 hNDKHTMIDKQSVRHYSTVMTEVSETLIRALTRIVFVENTATSIKWMSIFFVIWKVSAHVSTMDIVLAVVISAFIFPRLY 310 Mucor circinell...
EFC39794     182 fPFQNVEISQELVNKIVTGIVANVNSGLKYYLDILSCKELGKTLAFGVVVLIVSWLGKKMAGETFLYLALNVLFTLPLIY 261 Naegleria gruberi
XP_006852583 224 -LRRRYELNEDDVKRVVRVVLPLANEAFAKIRELFSG-EPLMTLRMAPLLLLAAEFGPLLSIWRLAAAGFLVSFTVPKLY 301 Amborella trich...
EER88893     277 -NKRSFQLTEEDVLRASQAVLPIANSMISMAQVIFSG-EPSMTLKVLPVLLFGAKYGGLVTVWRLVAAGFFTSFTVPKLY 354 sorghum
XP_003539539 207 -EKREIKLKEDDISRLAKLILPALNFALSRMRALFSG-EPSMTLKVVPFLLLGAEYGHLITIWRLCAIGFLVSFSVPKLY 284 soybean
XP_006582310 242 -KRSFAKLKEDDILHLAKLILPALNFAISKTRELFSG-EPCMTLKVAPFLLLGAEYGHLITIWRLCAIGFFVSFSVPRLY 319 soybean
EEF44385     256 -SRCNFKLKEEDILKLGRLILPPANLAISMARELFSG-EPSMTLKVIPFLLVGAEYGHLITMWRLCAIGFFIGFTIPKLY 333 castor bean
XP_010656999 250 -KRREFKLKEDDILRVARAILPATNLAISKTIQLFSG-EPSMTLKVAPFFLVGAEYGHLLTVRRLCALGFFISFTIPKLY 327 wine grape
VDC63656     245 -AKREFHVSEDDVLRLARRFLPAANLIISKTSELFSG-EPSMTLKVTPFLLIGAEYGHLITLWRLSAFGFFLSFTVPKLY 322 field mustard
XP_009129630 252 -EQREVKVSEEDVLRVARRMLPITNLAISKMSQLFSG-EPAMTLKVAPFVLIGAEYGYLITLWRLFALGFFLSFTLPKLY 329 field mustard

EPB88465     311 ISNKDVVDAQIQKG 324 Mucor circinelloides f. circinelloides 1006PhL
EFC39794     262 EWKQDEIDSVLKIA 275 Naegleria gruberi
XP_006852583 302 SSYSDQIQRQVKCT 315 Amborella trichopoda
EER88893     355 SCYSSQIHRRVEIL 368 sorghum
XP_003539539 285 SCYTAQINQRAEGL 298 soybean
XP_006582310 320 SCYSAQINLRVECL 333 soybean
EEF44385     334 SCYSSQINQKVDYA 347 castor bean
XP_010656999 328 SCYSAQINTRVEYL 341 wine grape
VDC63656     323 SCYTHQISQKVERV 336 field mustard
XP_009129630 330 SCYANQINQKVENA 343 field mustard
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