3EBQ


Conserved Protein Domain Family
Peptidase_C97

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pfam05903: Peptidase_C97 (this model, PSSM-Id:399119 is obsolete and has been replaced by 461775)
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PPPDE putative peptidase domain
The PPPDE superfamily (after Permuted Papain fold Peptidases of DsRNA viruses and Eukaryotes), consists of predicted thiol peptidases with a circularly permuted papain-like fold. The inference of the likely DUB function of the PPPDE superfamily proteins is based on the fusions of the catalytic domain to Ub-binding PUG (PUB)/UBA domains and a novel alpha-helical Ub-associated domain (the PUL domain, after PLAP, Ufd3p and Lub1p).
Statistics
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PSSM-Id: 399119
Aligned: 30 rows
Threshold Bit Score: 88.1536
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EBQ_A         9 YPVKLYVYDLS---KGLARRL-------SPIMLGKqLEGIWHTSIV-------VHKD-EFFFgS------GGISSCPPGG 64  human
1_pfamImport   1 NMVYLNIYDLDsvsKVVNTVA-------RSVGAGA-----FHAGVE-------VYGY-EYSFgYimd-geTGVTKTNARY 59 
Q8LN31         2 KEVVLHVYDVTnsdSEKTNNTilqinriFKDRIG--LGGIFHSAVQ-------VYGEeEWSFgFce--ngSGVFSCPIGK 70  Japanese rice
Q9SZZ4         2 AEVVLHIYDVTnsgSEKTNNTivqinrfFKDGIG--LGGIFHSAIQ-------VYGNdEWSYgYce--qgTGVFSCPSGK 70  thale cress
Q7SF35        22 TEILINVYDLL---PPGRISS-------TLWFLG--T-SLLHSGVV-------INGR-EYAYgGhthrgkTGVYWTAPRT 80  Neurospora crassa
Q8X1T0         1 MKVYINVYDLMpdsPVNK----------LAWTLGL---GIYHTGLV-------LEGK-EYAFgAheipgsTGVFATMPRP 59  Schizosaccharom...
O49393        17 VPVYLNVYDLTpmnV-------------YGYWLGI---GIYHSGLE-------VHGV-EYGYgAhek-ssSGIFEVEPKK 71  thale cress
Q6NQ19        18 VPVYLNVYDLTpinG-------------YAYWLGL---GIYHSGVE-------VHGV-EYGFgAhdh-stTGIFEVEPKQ 72  thale cress
Q8LA90        15 VPVYLNVYDLTpinG-------------YAYWLGL---GVYHSGVE-------VHGI-EYAYgAhey-psTGIFEGEPKQ 69  thale cress
BAD72532      44 SPVYLNVYDVTpanG-------------YARWLGL---GVYHSGVQgmyallsSPSI-LYAYgAhdg-agSGIFEVAPRR 105 Japanese rice
3EBQ_A        65 tLLG-PPDSVVDVGSTEVTEEIFLEYLSSLGESlFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFg 143 human
1_pfamImport  60 -HPYhVYRETIPMGKTPLTKEEVDLLVEVMKLQ-WIGDTYDILSRNCLNYADYFCNLLDVGGIPEWVMSLQKKVT---Wv 134
Q8LN31        71 -NPMyTYRECIVLGETECSIATVNRILRELSRE-WPGHSYDLLSRNCNHFCDVLCERLAVPKLPGWVNRFANAGDTAVVv 148 Japanese rice
Q9SZZ4        71 -NPMyTYREKIVLGKTDCTIFMVNQILRELSRE-WPGHTYDLLSKNCNHFCDVLCDRLGVPKIPGWVNRFAHAGDTALEv 148 thale cress
Q7SF35        81 ePPGgTFRCELLHGFTLATPAEIDAIIREASEE-FLGTAYNLLTKNCNHFTSHLCQKLTGLPGPAWLNRAASIGV---Al 156 Neurospora crassa
Q8X1T0        60 pLEGcRWRCSIALPNCTLPKPDVDRILIRLSQE-FTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIGLAFPTi 138 Schizosaccharom...
O49393        72 -CPGfTFRKSILVGETEMKAKEVRSFMEKLSEE-YQGNKYHLITRNCNHFCNHVSLKLTHKSIPSWVNRLARLGF---Lc 146 thale cress
Q6NQ19        73 -CPGfTFRKSILIGRTDLDPENVRVFMEKLAEE-YSGNSYHLITKNCNHFCNDVCVQLTRRSIPSWVNRLARFGL---Fc 147 thale cress
Q8LA90        70 -CEGfTFRKSILIGKTDLGPLEVRATMEQLADN-YKGSSYNLITKNCNHFCDETCIKLTGNPIPSWVNRLARIGF---Mc 144 thale cress
BAD72532     106 -CPGyAFREAILVGTTELTRAEVRAVMADLAAD-FPGDAYNLVSRNCNHFCDAACRRLVRARIPRWVNRLAKIGV---Vf 180 Japanese rice
3EBQ_A       144 qalRPLLD 151 human
1_pfamImport 135 ksnINIAA 142
Q8LN31       149 aenTAVKF 156 Japanese rice
Q9SZZ4       149 agnTAMRV 156 thale cress
Q7SF35       157 pcmVPKDW 164 Neurospora crassa
Q8X1T0       139 ---TNALL 143 Schizosaccharomyces pombe 972h-
O49393       147 ncvLPACL 154 thale cress
Q6NQ19       148 ncvLPAEL 155 thale cress
Q8LA90       145 ncvLPATI 152 thale cress
BAD72532     181 tcvIPGNG 188 Japanese rice
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