Conserved Protein Domain Family
Cas_Csa5
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pfam09702: Cas_Csa5 (this model, PSSM-Id:401589 is obsolete and has been replaced by 430763)
CRISPR-associated protein (Cas_Csa5)
CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry represents a minor family of Cas proteins found in various species of Sulfolobus and Pyrococcus (all archaeal). It is found with two different CRISPR loci in Sulfolobus solfataricus.
Links
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Statistics
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PSSM-Id: 401589
Aligned: 8 rows
Threshold Bit Score: 100.98
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q96X70          18 LLASVFI--YSESPTYVDRFANALSKEAVARVIYESQRIIqMGISSGEVKMGnveisgksmkiTDKKgeesYPAVIIKTK 95  Sulfurisphaer...
WP_009070150    24 ALALAAL--VQESTTVIDRMAYALTPEQSVRALNDALRTI-ASVSQGSTSFQvs-------qvQVKKeentYTFTEVKER 93  Metallosphaer...
jgi:Igni_1141   18 ALSY-FAdkEVRQFNIIDRLANAVNEEVALNTLYDAMRTLkTIITSNKVE-------------EVRR----FVRKFGELK 79  Ignicoccus ho...
imbp:Hbut_0645  13 LLSF-FA--RTRQFGVLDRIANALSPDQALAALYDALRVFrSSCLSES---------------PDKK----------CPN 64  Hyperthermus ...
WP_012021092    11 LLATASI--YAETPTLLDRISNALSKEAAVKVIGDCERIVnTGLNRGEIRLQ-----------TGEN-----PRIYIDVK 72  Metallosphaer...
KJR78538        18 LLAVATL--YANAPTFTDRMSNALNKESVMRALYDAERVVlAGKNKGDIT-------------EGKA------VISVKVA 76  Candidatus Ar...
Q97Y90          17 LLAVGFL--YSESPTLVDRFANALSKEAVTKVLYDVQRIVqMGIDRSEIATTtitiqgkdypaQGKD----YPAVNVN-S 89  Saccharolobus...
WP_013776538    16 LFATTYL--YSESSMLVDRFANALSKEAVAKVLYDAQRIVqMGLDRDEIKSDiv-------kiKEKD----YPAIVITKE 82  Acidianus hos...

Q96X70          96 EG---RNYIVVGYLPTDKDVEDFMSLVERD--IYYA---RKAGALAMSI 136 Sulfurisphaera tokodaii
WP_009070150    94 EGn--MRYKIPGGLPTQEEVTDFIDAVTAD--VRLA---RKVGAVALSL 135 Metallosphaera yellowstonensis
jgi:Igni_1141   80 DEggrPQYCYEGKCPA--ECKKVGEECCCDaeALYKlamREVDDLKHSF 126 Ignicoccus hospitalis KIN4/I
imbp:Hbut_0645  65 NA---EELVEKARYEVEKITELLLDSHRAEegLRLA---RTAAILALGR 107 Hyperthermus butylicus DSM 5456
WP_012021092    73 EGertKTYELYGSLSSSEDVTQFIEDVERD--IYTA---RKVGAVAMAT 116 Metallosphaera sedula
KJR78538        77 EN---ETAKVYGYLPSDLDVEEFLRMAERD--IYIA---RKVGAIAISK 117 Candidatus Aramenus sulfurataquae
Q97Y90          90 SG---AKYTVVGYLPTSQDIEDFLRMIEED--VYYA---RKAGALAMSI 130 Saccharolobus solfataricus P2
WP_013776538    83 KE---KSVQIIGYLPTDQDVEDFLSLIEKD--VYYA---RKAGALAMSI 123 Acidianus hospitalis
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