Conserved Protein Domain Family
ANAPC4_WD40

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pfam12894: ANAPC4_WD40 
Anaphase-promoting complex subunit 4 WD40 domain
Apc4 contains an N-terminal propeller-shaped WD40 domain.The N-terminus of Afi1 serves to stabilize the union between Apc4 and Apc5, both of which lie towards the bottom-front of the APC,
Statistics
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PSSM-Id: 403945
Aligned: 23 rows
Threshold Bit Score: 108.519
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002146022   41 LTYCPTMDLIALATEDEQLYVFRL-NGQEVLSAdlag---dpylDEVKGEIRGVRWKNDGRLLAVADAEN-KLRIISSYT 115 
XP_001624909   23 MKWSPKMDLLAVITAEGDVWLNRL-SWQQVWAV-----------SAGNEKAVCLAWRPDGNLLCVGYESG-EIKSFDIEN 89  
EEC05452       22 MLWSPKLDLIALALVQGQVALHRL-SRKRVWLRap-------pgGKEQNKVKSLAWRPDGKILAIAYDTG-RSRIRHVHN 92  
EEN65012       20 MQWNPKMDLLALANTQGEVWLHRL-NWQRVWTLspp------tgTTEGQGVTGLAWRPDGQVLGVGYQNG-QVVLCDVEK 91  
Q5PR93         19 MAWCPKRDLIALANTTGELLLHRLaNFHRVWSLpp--------nENTGKEITSLAWRPDGKVLAFSVGDTkQVVLCDAEK 90   zebrafish
EDW51260       22 MEWNNKMDLIAYGTEKGEVVIQRL-NWQKIVTFp---------tPGEDVRVRSLSWQMDETLLAVGYSNG-KVALLDAES 90  
Q17Q34         28 LKWSEKMDLLAIGNDKGEVILHRL-KWQKVWQLp---------pPEEGLLVRGIAWRPLEKVMAIAYSNG-TVILINIEN 96   yellow fever ...
Q7QBX1         21 LKWSQEMDLLAMGTEKGEVLLHRL-KWQKVWQLs---------pPEDGLKVRGLAWRPCEKFIAIGYSNG-TILLVDLET 89   Anopheles gam...
Q6BWV1         23 LSWCPTMDLLAISMNRMSIWVFRI-NGERIYSI------------NNKSLILDISWNPNGKFFCVSGIDG-YCKIYDSNS 88   Debaryomyces ...
P34441         26 MCFSSQNDLIALGSKTGEILLKRT-SWKMIWKTninmiqavgteCKLDSSVSALHFSPDGRFLAAATSKG-IIHLLDVET 103  Caenorhabditi...
XP_002146022  116 GKTVHHFSCLPHeaeghssspnestkdpkdirITCIGWGVN 156 
XP_001624909   90 AECVHKCSIGNT--------------------PTCMEWTEE 110 
EEC05452       93 ADIIHTIEVGSC--------------------ISTLTWASD 113 
EEN65012       92 AEVLHTSTLSHP--------------------VSCMTWQEA 112 
Q5PR93         91 AEILHLFPVEYP--------------------ASCMHWMEV 111  zebrafish
EDW51260       91 GTIISGLIYEDD--------------------IKKVYFSKA 111 
Q17Q34         97 KEEIYNFNVKSD--------------------ITCMNWTEN 117  yellow fever mosquito
Q7QBX1         90 KEEIHSFSVKQD--------------------ITCLTWTEN 110  Anopheles gambiae str. PEST
Q6BWV1         89 GKLINTIDSKQKs-------------------INLINWCYH 110  Debaryomyces hansenii
P34441        104 GKVRFSVKAASEk-------------------IAKLHWNCV 125  Caenorhabditis elegans
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