3UB4


Conserved Protein Domain Family
TIR_2

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pfam13676: TIR_2 (this model, PSSM-Id:404550 is obsolete and has been replaced by 463954)
TIR domain
This is a family of bacterial Toll-like receptors.
Statistics
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PSSM-Id: 404550
Aligned: 459 rows
Threshold Bit Score: 42.3087
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3UB4_A            13 VCVCHSEED-L-VAAQDLVSYL-EGstA--SLR-Cf--L----QL-RDAtpGG-AIVSELCQA--LSSS--H--CRVLLI 72 
KPA18586           8 VAFSYAGED-R-EYVSKVAECL-KN--I--GVK-VfydVdvisKT-W----GK-DLYTYL-EEvyYQKA--Q--YCVMFI 68  Candidatus ...
EST54528           4 VALSFAGED-R-EYVQQVADIL-HE--I--GIR-VfydVyeevDL-W----GK-DLYTHLDDIyrVKS---R--HCIMFI 64  Brevibacill...
jgi:AciPR4_2927  159 VVLSFAGED-R-AYVDQVAQIL-RD--S--DIS-LfydNyeevTL-W----GK-NLTEHL-HM--VYSSsaR--YCVMFI 219 Terriglobus...
jgi:Mpet_1645     92 VALSFSGNE-R-DYVKIVADSL-IK--N--KIN-VfydEyeevNM-W----GK-NLIIHL-EE--IFSNeaS--CVVIFA 152 Methanolaci...
P74570             9 IALSFAGED-R-EYVDRVANLL-RE--A--GVT-VfydIfeeaNL-W----GK-NLYDYL-SE--IYQD--KalFTIMFI 69  Synechocyst...
EEF78716          13 IALSFAGED-R-EYVEEVANHL-RA--S--GVD-VfydLfeeeDL-W----GK-NLYEHL-TS--VYRDqaL--FTVMFV 73  Methylophag...
WP_012164613       7 IAFSFAGEN-R-DFVARIANFL-AD--RfsKEQ-LlydKfhegEF-A----RS-DLAFYL-PS--LYEKeaD--LVVAIL 69  Acaryochlor...
jgi:CAP2UW1_3093 310 VALSFAG-EhR-LYVRDVASALtEK--L--GREaVfydYnfksQT--Av-pDSdLLLQHIY----HDQS--D--LVVVFL 372 Candidatus ...
EFK06457         213 VAMSFSG-E-KrRYVSLVVDALrEQ--L--GEDaVf--Y----DHdYQAqlarpNLDTLL-QG--IYHKqsD--LVVVFL 275 delta prote...
3UB4_A            73 TPGFLQDPWCKYQMLQALT--EAPGAEGCTIPLLLGlsRaAYPP-E---L----RFMY--YVD---Gr---GPD-GGF-R 132
KPA18586          69 SKSYEKKLWTDHERKYIQAr-EFESNKEYILPARFDdtvi----------sgvrKTIG--YIDln------nYSpFQFcE 129 Candidatus ...
EST54528          65 SKYYKEKLWTNHERASAQAr-AFIEKSEYILPVRFDn---tEIPg---------IRQTtgYLDln------kYSpEQFaT 125 Brevibacill...
jgi:AciPR4_2927  220 SENYAEKVWPTHERRSAFEk-AISSKEEYILPARFD-----D-Td----IpglsKHIS--YIDlr------kKSpDQFaA 280 Terriglobus...
jgi:Mpet_1645    153 SKNYVEKAYPCLEKDAALVt-AINSKKEYILIGKFD-----E-Tq----IpgipPSIK--YIDlk------kISaEQFaD 213 Methanolaci...
P74570            70 SEHYSRKMWTNHE-RQAMQarAFQEHQEYILPARFD-----ETPips-----vlPTVG--YISl------rSKTpEEFvE 130 Synechocyst...
EEF78716          74 SQFYVEKLWGNLERKSAQAr-AFRESSEYILPAMFD-----TYVeVpgmL----ETTG--YIDl------nKKTpGKLaE 135 Methylophag...
WP_012164613      70 CNNYNEKKWCGLEWNAIYSv-LMQRKNEEVMLLRFGn-C-EPTGl----F----GLAG--FVDld------dKTpEETaV 130 Acaryochlor...
jgi:CAP2UW1_3093 373 GGNYQGKEWCGLEWRAVRDl-IKKRDGKRIMFFRFD-----NVPv---------DGVF--SLDlaiDcgehSSA-EAA-S 433 Candidatus ...
EFK06457         276 CDKYAEKQWCGLEWRAIRDi-IKSKDDERVMFVRFDdaD-V--Eg----Vl---SIDG--YIDgg------kFTsKQVaD 336 delta prote...
3UB4_A           133 Q 133
KPA18586         130 I 130 Candidatus Magnetomorum sp. HK-1
EST54528         126 L 126 Brevibacillus panacihumi W25
jgi:AciPR4_2927  281 L 281 Terriglobus saanensis SP1PR4
jgi:Mpet_1645    214 L 214 Methanolacinia petrolearia DSM 11571
P74570           131 T 131 Synechocystis sp. PCC 6803
EEF78716         136 L 136 Methylophaga thiooxydans DMS010
WP_012164613     131 L 131 Acaryochloris marina
jgi:CAP2UW1_3093 434 L 434 Candidatus Accumulibacter phosphatis clade IIA str. UW-1
EFK06457         337 F 337 delta proteobacterium NaphS2
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