2N39


Conserved Protein Domain Family
DUF4208

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pfam13907: DUF4208 (this model, PSSM-Id:404744 is obsolete and has been replaced by 464035)
Domain of unknown function (DUF4208)
This domain is found at the C-terminus of chromodomain-helicase-DNA-binding proteins. The exact function of the domain is undetermined.
Statistics
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PSSM-Id: 404744
Aligned: 97 rows
Threshold Bit Score: 64.152
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2N39_A          5 SLDQKTFS-ICKERMRPVKAALKQLDRPEKG---LSEREQLEHTRQCLIKIGDHITECLKEYTNp---EQIKQWRKNLWI 77  
XP_003094116 1107 DSSAKPFLe-CVKLCMPVHKYMKKLKEA-------QESKNQADEAKYLTRLGDSFLDNLETLIKkkpkTNIRKWYNYLWI 1178 Caenorhabditi...
CDS40050     1434 QMRGSLFLk-CKQHLHPIKKLFKQLEhl-----eNHGITEGEKFNMVILGIGEHIRSLVGDIDd---rEERHTWKHLYWE 1504 Echinococcus ...
XP_018652255 1459 NMQGPIFVk-CKKKFVPIKKHFKELEdl-----eRTDEQNPVKLANVVLQIGDHIHSIIDVYPe---kEKRHAWKNYLWE 1529 Schistosoma m...
EFJ28029     1360 KERDQRWHnWCEGVMKGEVRTLKRLQNLK-SahsESNEKVVVRVKKYLQKLGQKIDSILDDNKGe--kCNPQKMAMRLWN 1436 Selaginella m...
ERN05058     1134 ETKEEKWReWCAEIMSDEIRTLRRLEKLQTTsvdLPKEEAIFKVKTYLQVLGKKIDFIVKEHGNa---RNYIRMTTRLWN 1210 Amborella tri...
XP_009414951 1504 KLKEEKWMeWCADVMEEEEQTLKRLQRLQTTsidLPKEKVLLRIRRYLQLIGRKIDNIVQQHEVs---YKQSRMTMRLWN 1580 wild Malaysia...
XP_004355670 1589 RPDTRLLLk-CEQYLQPVQKHLDKFKNLSD----LEREAKVRKTKKYMLSLGGEITKIVGHQRGt--eDIKNKLEKHLWL 1661 Cavenderia fa...
EFA77354     1720 KYDQTTLNk-CKQYLTPIKKHLEKFKHLSDSsvtMSREDKLHKTKKYLLSLGNEITSVMDKH------KGNESLENHLWY 1792 Heterostelium...
EGC33573     1710 NYNRDLLRk-CKGYLSPIRDLLQKFQVLSDSkrpISREEKVMKTKKYLLALGNEISGIVDDHYKsp-sSKKDELDSHLWY 1787 Dictyostelium...
2N39_A         78 FVSKFTEFDARKLHKLYK 95  
XP_003094116 1179 FLCKFTLREPGEMADRYR 1196 Caenorhabditis remanei
CDS40050     1505 FVQNFSEKDALQLEQAYS 1522 Echinococcus multilocularis
XP_018652255 1530 FVHIFSKNSTEELRHVYR 1547 Schistosoma mansoni
EFJ28029     1437 YVARFSDLSGPDLSDLYH 1454 Selaginella moellendorffii
ERN05058     1211 HVANFSNLSGERLSEIYS 1228 Amborella trichopoda
XP_009414951 1581 YVSTFSNLTGERLHEIYS 1598 wild Malaysian banana
XP_004355670 1662 YASGFTALGGDELKKLFD 1679 Cavenderia fasciculata
EFA77354     1793 YASQFTARGGEELRQLFN 1810 Heterostelium album PN500
EGC33573     1788 TASKYTASGGQELKSLYN 1805 Dictyostelium purpureum
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