Conserved Protein Domain Family
DUF4407

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pfam14362: DUF4407 (this model, PSSM-Id:405112 is obsolete and has been replaced by 464151)
Domain of unknown function (DUF4407)
This family of proteins is found in bacteria. Proteins in this family are typically between 366 and 597 amino acids in length. There is a single completely conserved residue R that may be functionally important.
Statistics
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PSSM-Id: 405112
Aligned: 75 rows
Threshold Bit Score: 111.575
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCY51247               18 DILEKCR-TDHKKFSAIGATILMTAFIAFCAGTSAAWYFTQSGDessgslgWAMLFGLIWSLLIFCIDRSLVITLkkDPS 96   Bacte...
jgi:Namu_1940          15 dprrpndpDNRVRHTATGLLLLAVGAWAFFATTATFYENLQLPLp------GAALVGALVATVVLTVDILITSSP--LTS 86   Nakam...
WP_015753220           18 YLLKNSSeASAKSVKKYLSAILIISILWAFIGYSFAKRYLKTDDv------VSIIVALIMVIVVIQIERQIILNI----- 86   Robig...
jgi:Niako_6186         18 giVRTSSeVSSKAVKKYTSAMLIVCILWSFVGFMFTQRYLRGNIw------GSVAGSALMVVIIVQIERQIILSL----- 86   Niast...
WP_008505780           18 rILQGCSeVAHRAVKRYTAALIIICTLWGFIGYTFVGKYLKGEWh------MSLFGGALFVLIILQVERQIILSD----- 86   Mucil...
WP_013443873           17 DILKNCSeASYKALKKYASSILILLFIWGATGYTFAQRYLSVHTw-----wGCALTALIFMIIVIQIERQVILTV----- 86   Palud...
O53930                 27 hwrelgerHERSTHAVAGVIVAVGAALAGLLASLAVSEAAQGPIss---piGAASLALVLGLLVGAVTRGTASGP----- 98   Mycob...
goetting:NONO_c00550   30 rpdrrgSaHEGSAYAVTGTVVLLFAVISGAVVSFAAAAAHRPGV-------IAVIAGIIAALLVGAVSRALATAP--LSR 100  Nocar...
Q5Z3Q4                 14 rpGAVDEpHERASYLLTGAAVALFALVTGGIVTAAAARAWPLA--------AAIAVGAVLAAAALLVGRALAT-----PR 80   Nocar...
WP_014980878           14 qpndvaYrHERTGYAVTGAVVLLFAIVSALVTAFAVGSVGTWPVl------GVLAVALLVGVPACAIARALAT-----PR 82   Nocar...
CCY51247               97 AKKQKFWVPLLSRSALACIIAFMVSIPLELVIFEDFIAEQKFFFDESSAKELSESTRAHreegvlsgeidlSTSTMSRLD 176  Bacte...
jgi:Namu_1940          87 DSPWAKLKVVLTRGLISLTIGIVISHTTILFMYRDALEKIVSDKNAAESAQIVETTTQNskwna---tisdANSRIAEYN 163  Nakam...
WP_015753220           87 ---SQSIWPKLFRGLIAIVMAIIGSVIIDQIVFKEDVEKIKIAEIQSQVDEV-------------------VPARTRIIQ 144  Robig...
jgi:Niako_6186         87 ---ARNRWLYISRGILAALMAILGTIIIDQIIFKEDIELEKITFIQKRVDQG-------------------LPPKTQELN 144  Niast...
WP_008505780           87 ---PGGKAKYWVRGSIAFIMAIIGSIIIDQYIFREDIAHKELFELNAQVDSL-------------------MPSKQAELK 144  Mucil...
WP_013443873           87 ---GKNKWIVRFRTLLAILMALIGSTILDQIIFKNDVEKVLVDIRADKINEI-------------------SGKRQKTMQ 144  Palud...
O53930                 99 ---ARGRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAAVQ--------------ASASLQQAR 161  Mycob...
goetting:NONO_c00550  101 RAGPRARAERFGRIAVAVLTGVIVAELASTVILGGSVARTLDDRARRDAESAASVVT--------------ARTELDRLT 166  Nocar...
Q5Z3Q4                 81 VGPMPDRFGVAGRATAAVLIGVLVAEAATTLLFTAGVDRVLDEKAHAAAESAPAVRA--------------ARAGYERAV 146  Nocar...
WP_014980878           83 PDRMPDKLGLLARVALAVLTGGLIAELAAIVVFGGSVDRTLDERAQRDAASAPQVVT--------------ARTQLDRAR 148  Nocar...
CCY51247              177 SLNIGLRGNVSSLNAQIQAERNKLNKPTTntfttaqnqynnyNNQINATQRNLANAKNaidsaiytseitrlkdlrrphw 256  Bacte...
jgi:Namu_1940         164 QQIAAADQTLADAQARLDDLKKQWSDDEIc------------VNGDYAANGD---------------------------- 203  Nakam...
WP_015753220          145 QQIFDLDSLITVKENALATTQQEFAEKPQ--------------------------------------------------- 173  Robig...
jgi:Niako_6186        145 TQIASIDTAILKKEADRSQLIDEVTKTPYikt------------------------------------------------ 176  Niast...
WP_008505780          145 RQINEADSGLAKKERERTTLITELTRNPFikv------------------------------------------------ 176  Mucil...
WP_013443873          145 LEINKLNMIIDSLDVINSKLNDEVA------------------------------------------------------- 169  Palud...
O53930                162 NARTALDSAVERARGRLDDALVVARCEYHptp-------acpQTRITGVPGRGPETRT---------------------- 212  Mycob...
goetting:NONO_c00550  167 AERGALAATIAGAQTDMDQALIVARCEYNptp-------qcpQTKITGVPGRGPETRT---------------------- 217  Nocar...
Q5Z3Q4                147 ADRAALDRTIAEAKAETDRALVTARCEYNpap-------qcpPTRITGVPGDGPEHRT---------------------- 197  Nocar...
WP_014980878          149 DDRTALDRAIAKAQDDIDRTMTIARCELNpgp-------ecpQQLITRVPGRGPEAQV---------------------- 199  Nocar...
CCY51247              257 rtmeneKKAWNDKINKRIKELEGErsiaegqia------------qnttdyvrESERLAHNRDTRDSLATERGKIIQDFR 324  Bacte...
jgi:Namu_1940         204 ------RCTRGETAQTLLEAYENYrdivfppiq-----------tnhdsvvksLTADRDSQNKILNDAIAAKAAEVASAT 266  Nakam...
WP_015753220          174 ------IRSVLVETREELVQEEDSsgqlqdvkiqlkdykthlisnpigaqipvLDEQIQEHRRMRMAKEDEIVNIRAQTE 247  Robig...
jgi:Niako_6186        177 ----tsTQSSPIKKQTTIKDSSGKiitteqvvnstsvs-vttvpnpkftliatLDQTISNLRTDKSKKDSALLNIRPELE 251  Niast...
WP_008505780          177 ----vtRQDVPVPISTVVVDSNKRsitrtnqvlktani-vnsipnpkssmvnsIDQQIKDMGAIKALLEERLIRLRSDVE 251  Mucil...
WP_013443873          170 ------KRPTIAVTNVTTEKNPVVnqdgtkttntktivstqhvantrieqiksNTATIDKCRSRLDELYNQKINVEVTVR 243  Palud...
O53930                213 ------ANQLLADAQRELDNALAA-----------------------------RDHQAPALDAKMAH--DEQALAEVRQA 255  Mycob...
goetting:NONO_c00550  218 ------AESMLEDARGRLSA---------------------------------AQARVQPLDEQIAG--AQTALDRARTA 256  Nocar...
Q5Z3Q4                198 ------AQEMLAEARARLAA---------------------------------AEERVPGLDARVAE--AEKSTAAALSD 236  Nocar...
WP_014980878          200 ------ANDMLDDARKQLAV---------------------------------AQARVEPADQRIAD--AEKAVTAAESA 238  Nocar...
CCY51247              325 QTSNKGNHFIQNYRIlEYAVWKRDAngnlpTELFFLWMIRLLFFIIEILPTVVKIVTPVGSYDRMIQAEE 394  Bacteroides sp....
jgi:Namu_1940         267 QATSENTGLAAQTTA-LVTLLKEDP---------FVWIWPAFFIALDLVVALMKAILPESDFDRTRRvkr 326  Nakamurella mul...
WP_015753220          248 KELSEKTGLLDEITI-LFKIILSSW-----IAGVVWGCIFLFFLSIELFVLISKSFESDSDYDRLVRHQK 311  Robiginitalea b...
jgi:Niako_6186        252 KQISSKIGFLDELEI-MCKLITGSG-----VAFFVWIIWFLFLMWLEMLVLISKLTDAKSDYEETIKHQm 315  Niastella koree...
WP_008505780          252 REAKTNRGFLQELQV-MQKILNESG-----PALVIWLLWFFLLLGLEVFILVNKIANAETDYDVTIQHHm 315  Mucilaginibacte...
WP_013443873          244 KELEANAGFLEELKA-MIVLISSEA-----LAGVFYFLLFTFILALELLVVVSKTKDVTCDYDLVVEHQL 307  Paludibacter pr...
O53930                256 VVADAGRGLGSRWVA-MNDLTLASA-----GALTARMLAIAFFALLYLLPLILRLWRGDTTHDRHAAARA 319  Mycobacterium t...
goetting:NONO_c00550  257 AFRTGDRGPGARWLA-MNEYTTGHA-----GGLLLRLLTLVVAVLLALLPLLLRIWRGESSFDRAVAAga 320  Nocardia nova S...
Q5Z3Q4                237 AHTAGDRGVGARWAA-MHDHTTDSM-----GALLPRLATLLACLLLALLPLLLRWWRGVTSVDRHAAARa 300  Nocardia farcinica
WP_014980878          239 AFTAADRGLGARWQA-MNDYTTQHA-----GAMPLRILTIISMIALALLPLLLRWWRGDTSFDRATAala 302  Nocardia brasil...
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