1M5Q


Conserved Protein Domain Family
SM-ATX

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pfam14438: SM-ATX (this model, PSSM-Id:405176 is obsolete and has been replaced by 464173)
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Ataxin 2 SM domain
This SM domain is found in Ataxin-2.
Statistics
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PSSM-Id: 405176
Aligned: 108 rows
Threshold Bit Score: 49.8536
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M5Q_1          1 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDN----------QLNIVLANASNKAG-----------------EKFNRVF 53   Pyrobaculum a...
EGX44732       93 TVYLLGNCVGRKAVATIKSGAQFQGIYSGSAMt--------gDFGCVLKFAKQIRGpqgeednf--vtgyiggGFEKTLI 162  Arthrobotrys ...
CCX10457      114 TLFLLTKLMGREVTVTVKSGAQYIGVLTGVDAk--------qDISVVLKQAKLLRAdpsdseekakegeyvggGADKVMI 185  Pyronema omph...
EGD74018        6 DVFLYGRSIGTNISVQTQSGSVYRGILSSVDPk---------SGDLYLRMAYLVNDksgpkpfdfpepvpnqeTCIQQLC 76   Salpingoeca r...
XP_002493704   62 LLFALAHSIGSKVIVTVGSGSSYSGMLVSFNDfaa-----dsELSVIVKYPELIDGsqen----------daeELPETLV 126  Komagataella ...
XP_013933698   89 LLFGLIRSIGCKSRITTNSGATYDGILYTSGDit------dsGVGLILKYPQLKKGsftpse-----evnnkaELPETLI 157  Ogataea parap...
XP_002619491   58 LVDLVAKSCGKTVVATVSSGARYKGLLSSVDIpps-----gnGMSVSLVGPRLVTRalldek------snsdsDLPETLL 126  Clavispora lu...
XP_001527448  151 LIYLISKSIGNSVIITTTDGSRYRGLLVATDLskn-----paPLSVVIQHPQLVNKglidek-----nnldgkKLPQTLI 220  Lodderomyces ...
Q6BJB7         39 LLHLVAKSIGKKCIVTVSSGARYQGLLVSADLssqqgqdvssPLSIVLQSPQIFSKslideks----nadksnEIPEKLV 114  Debaryomyces ...
CCE78470       54 LIYLVTKSLGKRCIVTVSSGARYEGLLTNADLlsnqt-qnptSLSVALESPRNVSKpllneks----nidderELPDKLI 128  Millerozyma f...
1M5Q_1         54 IXYRYIvhIDSTER 67   Pyrobaculum aerophilum
EGX44732      163 IEPKDL--MDLEIA 174  Arthrobotrys oligospora ATCC 24927
CCX10457      186 FEAKDF--VDLAAN 197  Pyronema omphalodes CBS 100304
EGD74018       77 IEWKKI--GQVHLP 88   Salpingoeca rosetta
XP_002493704  127 FKAKDI--VAVEIE 138  Komagataella phaffii GS115
XP_013933698  158 FSEKDI--LKMEFE 169  Ogataea parapolymorpha DL-1
XP_002619491  127 IQAKDLidVEIVLS 140  Clavispora lusitaniae ATCC 42720
XP_001527448  221 VPAKDL--IDFEIE 232  Lodderomyces elongisporus NRRL YB-4239
Q6BJB7        115 IQAKDL--MDLEVS 126  Debaryomyces hansenii
CCE78470      129 IPANDL--IDVEVF 140  Millerozyma farinosa CBS 7064
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