Conserved Protein Domain Family
KCNQ2_u3

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pfam16642: KCNQ2_u3 (this model, PSSM-Id:406935 is obsolete and has been replaced by 465213)
Unstructured region on Potassium channel subunit alpha KvLQT2
KCNQ2_u3 is a region of natively unstructured sequence on potassium voltage-gated channel subfamily KQT member 2 proteins from higher eukaryotes. It lies between families KCNQ_channel, pfam03520, and KCNQC3-Ank_bd, pfam11956. The function is not known.
Statistics
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PSSM-Id: 406935
Aligned: 10 rows
Threshold Bit Score: 49.8491
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007475625 494 PAPPYHSPEESREHIDKNGCiIKIIRS---TSSMGQKNFSAPP---------------APAMPSNTCPPSTS-------W 548 gray short-tail...
3_pfamImport   1 PAPPYHSPEETKEEKDEDDA-TKVEKKantCSAMADVSRSDRSlekkdpllgqsvarsVGTPSGSNSRPSTS-------W 72 
1_pfamImport   2 PAPPYHSPEDSREHLGKNGCiVKVVRS---TSTMGQKNFAAP-----------------PAAPPTPCPPSTS-------W 54 
2_pfamImport   2 PAPPYHSPEDSRDHADKHGCiIKIVRS---TSSTGQRNYAAP-----------------PAIPPAQCPPSTS-------W 54 
ELK04410     592 PAPPYHSPEDSREQGERGSCiVKLIRS---TSSMGHKNFSAP-----------------PAAPAAQCPPSTS-------W 644 black flying fox
OCA15305     457 PAPPYHSPEDSRDPVDK-SCiTKIIRS---SSSMGQKNFSAPP---------------AQLTPTTHCPPSTS-------W 510 tropical clawed...
4_pfamImport   2 PAPPYHSPVDQRDHTEKGGLvPKMVRS---SSSMGHRNYSAP-----------------------TCPPSTSlqpisshF 55 
XP_006639510 639 PAPPYHSPVDSREHMEKNGCiTKIIRS---NSSVGQKNFDAPP---------------ASTGPQNHCPPSTS-------W 693 spotted gar
5_pfamImport   2 PAPPYHSPVE---HMVKSGSiNKIIRS---NSSAGQKNFDPPP---------------STCVNH-HCPPSTS-------W 52 
XP_005993541 563 PAPPYHSPEESREHVDKNGCvTKIVRS---VSSVGQKNFAAPP---------------TSPVQHSGCTPSTS-------W 617 coelacanth
XP_007475625 549 QHQ---AYQR---Q------SHGSSPV---G-DNGSLVRIPPPPS--HERSLSAYS 586 gray short-tailed opossum
3_pfamImport  73 QHQlqhPLSQpawGss---mANTPSPIlaaGdQSPPVFRLPPPPAptHDRSSSGAC 125
1_pfamImport  55 QPQgcpRQGP------------SSSPV---G-DPGALVRIPPPPS--HERSLSAYS 92 
2_pfamImport  55 QQS----HQR-----------HGTSPV---G-DHGSLVRIPPPPA--HERSLSAYG 89 
ELK04410     645 QQQ---SHGR---P------GHGASPV---G-DHGPLVRIPPPPA--HERSLSAYG 682 black flying fox
OCA15305     511 QQQq--PYHR---H------SHGSSPV---G-DPGSLVRIPPPPS--HERSLSAYG 549 tropical clawed frog
4_pfamImport  56 HQQaqaSSQR---Sh-----RNSPSPV---G-D-GQLVRLPPPPA--GERH----- 91 
XP_006639510 694 QQQpisEYHR---C------SQGTSPV---G-DPSSLVRIPPPPS--HDRSSAGHN 734 spotted gar
5_pfamImport  53 HPQtapEAGQ------------GSSPM---G-DP-SLVRIPPPPA--NERSSGGHS 89 
XP_005993541 618 QRQq--QQHR---GngyphyCHGSSPV---A-DNDSFVRIPPPPS--HERPFSAYN 662 coelacanth
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