Conserved Protein Domain Family
PDZ_6

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pfam17820: PDZ_6 
PDZ domain
This entry represents the PDZ domain from a wide variety of proteins.
Statistics
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PSSM-Id: 407688
View PSSM: pfam17820
Aligned: 80 rows
Threshold Bit Score: 34.4383
Threshold Setting Gi: 90076052
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001744544 454 FITTVVPGGPSDKglAG-LLPRDIILKVNGTPCprGPRTHVVALVKnTPPGQPLELVVCR 512  Monosiga brevicollis MX1
EJL78465     146 VVREAVAGGPAAA--AG-LQAGEVLLSVDGRPVadLGGNELSELLF-IPVASPVQLVSQR 201  Polaromonas sp. CF318
KNC98547     299 TVSQVVPKGPAD----GrLEAGDILLKVNGQSL--ISFVPLEEILD-SSVNEEIHLLVQR 351  Spizellomyces punctatus DAOM BR117
EEC12200      49 FSAQVDPGGKAAT--DGgVRVGDLVLCVNDVRC--SQLDQVLQLID-SAFSTVTLLLWRR 103  black-legged tick
WP_068342120 364 LVQRVVPGSPAAS--AG-IAEGEELLSVNFLPInvLSLTDLSHLLH-SQDGRVLLLLLRR 419  Hymenobacter sp. PAMC 26554
KEJ88652     395 GVAVVQTGPYAAR--AG-LRAGDVLSSINDEVL--DHPEAAAELLS--GKQRSISMVVQR 447  Sulfitobacter donghicola DSW-25 = ...
WP_058318675 401 GVIVEGTGPYAAR--VG-LQRGDILLGINGEQV--TTPSEAREILS--QLGSRVAITVQR 453  Thalassobius mediterraneus
O67451       196 IFEWVKPGSLFYK--LG-LRRGDILVSINNTTI--RSGEDAFRILQmIRNEPNLKVELIR 250  Aquifex aeolicus
CCK74668     223 GYKVSNSGSMLTQ--LG-LQPGDVILSVNGQTL--GNLNDDQMLLEqVTNSGQARLEIQR 277  Oleispira antarctica RB-8
CCI47757     115 QITAVMDGTPASR--CG-LRVGDIVVAVSGLPVseLQFSNIIGYLK-SNARKSVVLKLRR 170  Albugo candida
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