Conserved Protein Domain Family
WD40_2

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pfam19056: WD40_2 (this model, PSSM-Id:408826 is obsolete and has been replaced by 465964)
WD40 repeated domain
This entry contains an array of WD40 repeats found in RhoGEF proteins.
Statistics
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PSSM-Id: 408826
Aligned: 28 rows
Threshold Bit Score: 493.359
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_019205731  531 VFSSRTHTLKLEAALHSPSQSRLLGFCTASTSLPQGYLWVAGGggNSNHGQVEIFSLNRASARLVKTLPLRAPVLCLEYV 610  Nile tilapia
XP_017332218  890 VVMSRLQEFKVECAVHNPEPHVNSESTADVPAVGHGCVWVASC--TNQMAQIAVVAMQNSSPKVTECFNVESRILCMTYV 967  channel catfish
XP_005044261  870 VMMAKQQEFKIECAAYNPEPYLAGETESDSFAMEHGFLWIGSC--TNQMGQIAIVSFQSSSPKVIECFNVESRILCMVYI 947  Collared flyc...
AFE80997      862 VMVAKQQEFKIECAAYNPEPYLNNESQPDSFSTAHGFLWIGSC--THQMGQIAIVSFQNSTPKVIECFNVESRILCMLYI 939  Rhesus monkey
EHB02141      858 VMVARQPEFKIECAAYNPEPYLNNESQRDSLSMARGFLWIGSC--SSQMGQIAIISFQNSSPKVIECFNVESRILCMVYV 935  naked mole-rat
XP_016047280  829 VTVAKQQEFKIECAVYNPEPHPHSDGQLDPLSSAHGFLWIGSC--SSQMGQVAIVSLHSSSPKVIECFNVESRLLCMAFV 906  western Europ...
ELK10066      761 VTVAKQQEFKIECAAYNPEP-----QPPDPTAPARGFLWIGSC--TSQMGQIAIVSLQNSNSKVIECFNVESRILCMVHV 833  black flying fox
XP_014352505  909 VMMSKQQEFKVECAVYNSELFCGYDDVPNSSSVEHGFLWIGSC--TNHMGQIAIVSLHNSNPKVIECFNVESRILCMVYV 986  coelacanth
KAE8603353    635 VVMSKQQEFKIECAVYNPEPYLSSENDPDTLSMHHGFLWIGSC--TNQMGQISVLSLHNRSPKVLECFNVESRILCMVYI 712  tropical claw...
XP_015213367  884 VIMSKLQEFKVECAVHNPEPFCGDDNIPDALSMGHGCLWIASC--TNQMGQISIVALHNSNPKVTECFNVESRILCMVHI 961  spotted gar
XP_019205731  611 KEpCPS--TEEKTEKAQRAAK----TG-NIICVGLQDGSIHVQSSVDTAVQCLLTL-VNPDNCPVLCLKHSLSFLFAGLA 682  Nile tilapia
XP_017332218  968 PV-D-EppEDREGN-PEPr-----cCNtPNVCVGTEEGSISVYKSSQRSKKVRLQHfFTPDKAAVTCLAYKSPFLYAGLV 1039 channel catfish
XP_005044261  948 PE-EEKlkEQNKAPDSENVLAk--iSNvPTICLGMEEGSISVYKSCQGSKKIRLQHfFTPEKSTVMSLTYRSQYLFAGLV 1024 Collared flyc...
AFE80997      940 PV-EEKrrEPGAPLDPETPAVr--aSEvPTICVGTEEGSISIYKSSQGAKKVRLQHfFTPEKSTVMSLACTSQSLYAGLV 1016 Rhesus monkey
EHB02141      936 PV-QEQhrEPSAASDPEPLTTh--tSDvPTICLGTEEGSISVYKSSQGSKKVRLQHfFSPEKSTVVSLASSPRGLHAGLV 1012 naked mole-rat
XP_016047280  907 PP-LPSprVSNTVP--IPDATr--tYEvPTICLGTEEGSISVYKSSQGSKKVRLQHfSTPERSAVLCLTCSPKHLYAGLV 981  western Europ...
ELK10066      834 PA-EGDgqEPSATAGPEATAGr--aPGvPTVCLGTEEGSISVYQSSQGAKKARLQHfFAPERSAVLSLACTPRSLCAGLV 910  black flying fox
XP_014352505  987 PE-EEKqdDPIIFVDSEIVVGk--vSEsPTICLGMEEGSISVYKCSQGSKKVRLQQfFTPEKSTVMSLAYKSQCLYVGLV 1063 coelacanth
KAE8603353    713 PE-EAKqkQLSDAPDLENGSSr--vPDvPTICLGMEEGSICVYKSSQGSKKVRLQHfFTPEKSTVMSLASISQCLYAGLV 789  tropical claw...
XP_015213367  962 SP-E-KtqEELEGG-PETEHMtgksPDsPTVCLGMEEGSISVYKSCQRSKKIRLQHfFTPDRSTVMSLVYSSPCLYAGLV 1038 spotted gar
XP_019205731  683 NGKVAIYHRKT-GerLWDvDS-CRLMSLGSKPVYCLLALEDTVWASCENQVTVIQGDSLCV-QSFEAHADpdFSVSHMVH 759  Nile tilapia
XP_017332218 1040 SGSLAVYSRTPdG--SWD-FSsVRLLKLGVLPVKALLAVGECVWASSGGHVFVIDARTHTMeHQLEAHQEegMVVSQMVV 1116 channel catfish
XP_005044261 1025 NGNISIYTKAEdG--TWN-TEpQKIVKLGVLPVRSLLVMEETIWAACGGQIFIISTVTHSIeSHFEAHQEegMVISHMAV 1101 Collared flyc...
AFE80997     1017 NGAVASYARAPdG--SWD-SEpQKVIELGVLPVRSLLMMEDTLWAASGGQVFIISVETHAVeGQLEAHQEegMVISHMAV 1093 Rhesus monkey
EHB02141     1013 NGSVASYAKAAdG--SWN-VEpQKVIDLGVLPVRSLLVMEDTLWAASGGQVFIIGTETHAVqSQLEAHQEegMVISHMAV 1089 naked mole-rat
XP_016047280  982 HGTVAVYTRAEdG--SWD-PEpEKVIKLGVLPVRSLLLVEDMLWAASGGHVFVISVDTHTVeNQLEAHQEegMVVSHMAV 1058 western Europ...
ELK10066      911 GGAVAVYAKAEdG--AWD-PEpQMVIKLGVLPVRSLLVTEDALWAASGGQVFVIGMETLSVq------------VSG--- 972  black flying fox
XP_014352505 1064 NGSVSIYTKSEdG--SWN-PEsPKVIKLGVLPVKSLLIMDDYLWAASGGQVSIISTKTHTVeSQLEAHQEegMVISHMAV 1140 coelacanth
KAE8603353    790 NGNLATYTKAEdG--NWN-TDqPKLIKLGVLPVRSLLIMERTIWAASGEQIFIIGQDSNAIeHQFEAHSEegMVISHMAV 866  tropical claw...
XP_015213367 1039 SGAVAIYSRTEdG--AWS-TDsPAVVKLGVLPVKSMLAMEDTIWASSGGQVFIIGSQTQAIeRQLEAHQEegMVISHMAV 1115 spotted gar
XP_019205731  760 SGGGVWMAFTKGSSIHLFHTETLQQLQEVNISTRTNYLSPG--HICVSSLLISQGMLWVGTSQGVIITFSVPTLEGIPKI 837  Nile tilapia
XP_017332218 1117 AGVGIWIAFSSGSTLRLFHTETLEHLQDINISTPVHNILSGhqRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKV 1196 channel catfish
XP_005044261 1102 AGVGVWIAFTSGSTLRLFHTETLKHLQDVNIATPVHNMLPGqqRVSVTSLLVCHGLLLVGTNLGIIVALPVPRLQGIPKV 1181 Collared flyc...
AFE80997     1094 AGVGIWIAFTSGSTLRLFHTETLKHLQDINIATPVHNMLPGhqRLSVTSLLVCHGLLMVGTSLGVLVALPVPRLQGIPKV 1173 Rhesus monkey
EHB02141     1090 AGVGLWVAFTTGSTLRLFHTETLKHLQDVNIAAPVHGMLPGhqRLSVTSLLVCHGLLMVGTSLGLVVALPVPRLQGIPKV 1169 naked mole-rat
XP_016047280 1059 SGVGIWIAFTSGSTLRLFHTETLKHLQDVSVATPVSHMLAGpqHLSVTSLLVCHGLLMIGTSVGIVVALPVPRLQGIPKV 1138 western Europ...
ELK10066      973 -----WASSAG--------------------GA-------GhqRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKV 1020 black flying fox
XP_014352505 1141 AGVGIWIAFTSGSTLRLFHTETLQHLQDINIATPIHNMLPGqhRVSVTSLLVSYGLLLVGTNLGIIVALPVPRLQGIPKV 1220 coelacanth
KAE8603353    867 AGVGIWIAFTTGSTLRLFHTETFEHLQDINIATPIHNMLPGqhRVSVTSLLVCHGLLMVGTNLGVIVSLPVPRLQGIPKV 946  tropical claw...
XP_015213367 1116 AGVGIWIAFSTGSTLRLFHTETLEHLQDINIATPVHNMLSGhqRVSVSSLLVCHGLLMVGTNLGVLVALPVPRLQGIPKV 1195 spotted gar
XP_019205731  838 TGKAMTSLNAHCGAVDFLVSASSTLasdlLRRDSIFNISKESANGEGGGgggnVEGE---RGEqklensrhtENlETSPW 914  Nile tilapia
XP_017332218 1197 TGRGMVSFHAHHSPVKFLIMASPVR-------NAVPTITDPPSQRAPP---------------------------SEEDE 1242 channel catfish
XP_005044261 1182 TGRGMVSYHAHNSPVKFLVTATSIN-----KKNRNKLRNSLPPGSESKd----DDQK---NIL---------HS-ERPGS 1239 Collared flyc...
AFE80997     1174 TGRGMVSYHAHNGPVKFIILATALH-----EKDKDKSGDGLAPGPEPQd----EDQK---DAL---------PS-EGTGS 1231 Rhesus monkey
EHB02141     1170 TGRGMVSYHAHSGPVKFIVLATASP------KDKDKARDSPPPGPEPPd----EEQK---DEP---------SG-DRATS 1226 naked mole-rat
XP_016047280 1139 TGRGMVSYHAHNGPVKFLVAAAALE------KEPHKPQD-SPPPAGPQd----EEQG----EG---------PQ-EGPGL 1193 western Europ...
ELK10066     1021 TGRGMVSYHAHSGPVKFLIAATTAP-----KADKDKPRASPAPGADPQd----ADQK---DAL---------PG-EGAWP 1078 black flying fox
XP_014352505 1221 TGRGMVSYHAHNGPVKFLKVVSAVN----NKRNSSTSINNIPSQLEAKd----GDRRds-iIM---------HA-EGSSS 1281 coelacanth
KAE8603353    947 TGRGMVSYHAHHSPVKFLVKATAIN----KKYRRTPSRCSQISHSELKn----EDSHc-tGVQ---------QN-DEAAA 1007 tropical claw...
XP_015213367 1196 TGRGMVSFHAHCGPVRFLTMAEAIT-------RAAQRSSSVGSLPRPMEg---KDGEkavANP---------LG-SSSSL 1255 spotted gar
XP_019205731  915 K--QDKPKhl---llQYHLHSTSQlPGKLLTAQPEQG---NpRASPDLQMEDGSIYEVNEDPdVWL-RGRplelgKEGEA 985  Nile tilapia
XP_017332218 1243 T--PRCTAsf---laEGDGVHPVPiRQDSLSSS---------RSSLEHGPEDGAIYDLLSDP--AH-SQN-----TKRVQ 1300 channel catfish
XP_005044261 1240 S--LSNTQdta-vwlGDSIGSIAQ-RSDLSSSSGSLTlshG-SSSLEHRPEDSNIYELLKDQnISF-KSK-----RQKSK 1308 Collared flyc...
AFE80997     1232 S--LNQGDadtaiwlGDSLGSMTQ-KSDVSSSSGSLSlshG-SSSLEHRSEDSTICDLLKDP-VSL-RSK-----ARRAK 1300 Rhesus monkey
EHB02141     1227 C--PGQGDlttaiwlGDWPGPGLQ-KSDLSSSSGSLSlshG-SNSLELRAEDSSMCDFLRDPaGPV-RGR-----ARPSR 1296 naked mole-rat
XP_016047280 1194 GpcTGPSDldtaiwlGDSLGSVTH-KSDVSSSSGSLTpsqG-SGSLEHQTEDSVLGELLRHP--GLmPSG-----GRRAR 1264 western Europ...
ELK10066     1079 C--PSQHSsda-vwlGTSPGSATH-RSGLSSSG-SLE------------PGSEDGFDLLQHPgTTP--AR-----GPCAS 1134 black flying fox
XP_014352505 1282 S--VANTNdkg-vwlGDSVLPIAQ-QSSLSSSSGSLTlshG-SSSFEHGTEDGAIYELLNDPsVSHkSKH-----NKKSR 1351 coelacanth
KAE8603353   1008 Sa-TNNNNdsa-vwlGGSMGSIAQ-KSDLSSSSGSLTlshG-SNSCDAGKEDCTLSDLLGDPsMPLpNSK-----QQKAK 1078 tropical claw...
XP_015213367 1256 A--SAQDKgl---wlGDS-SRPIAqQGSLSSSSGSLAl--S-HGSLEHGPEDGALYDLLHDP--SF-AHR-----GKKTQ 1318 spotted gar
XP_019205731  986 KRNkvtSTAIFSGGRgYRRIGLSSseeTcsDSSENTLLVWQLPLTL 1031 Nile tilapia
XP_017332218 1301 RANv-sSVLVLSGGSgHRKINRKSk-aArhEENMPTVMVWQIPVPD 1344 channel catfish
XP_005044261 1309 KMKa-sSVLVISGGQgHRRVNKKTk-qQrqDELVSSVMVWQIPLLN 1352 Collared flycatcher
AFE80997     1301 KAKa-sSALVVCGGQgHRRVHRKAr-qPhqEELAPSVMVWQIPLLN 1344 Rhesus monkey
EHB02141     1297 RAKa-sSALVVCGGQgHRRMHRKAr-aPppEELLSSVMVWQIPLLS 1340 naked mole-rat
XP_016047280 1265 RARa-gSVLVACGGQgHRKVSRKTr-pQrpEELASSLMVWQIPLLP 1308 western European hedgehog
ELK10066     1135 SARv-sSVLLACGGQgHRRLGRRAr-qPrpEELVSSVMVWRIPLLN 1178 black flying fox
XP_014352505 1352 KMKv-sSVLVISGGQgHRRINKKSk-qQrqDEVVSTVMVWQIPLLN 1395 coelacanth
KAE8603353   1079 RLKa-dSVLVISGGQghrklnkkvkpqrqeelvssamvwqiplnm- 1122 tropical clawed frog
XP_015213367 1319 KAAv-sSVLVVSGGPgHRRVIKKTk-aPrqEETVSTIMVWQIPLLN 1362 spotted gar
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