1AOA,1BKR,6D8C,1AOA,1DXX,1QAG,1WYM,1WYP,1WYR,2D85,2E9K,2JV9,2RR8,2VZC,2YRN,3BYH,3KY9,3LUE,4B7L,4Z6G,4Z6G,5A4B,5BVR,6ANU,1P2X,1P5S


Conserved Protein Domain Family
CH_SF

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cd00014: CH_SF 
Click on image for an interactive view with Cn3D
calponin homology (CH) domain superfamily
CH domains are actin filament (F-actin) binding motifs, which may be present as a single copy or in tandem repeats (which increase binding affinity). They either function as autonomous actin binding motifs or serve a regulatory function. CH domains are found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, as well as proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Links
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Statistics
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PSSM-Id: 409031
Aligned: 306 rows
Threshold Bit Score: 40.0145
Created: 1-Nov-2000
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
actin binding
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:actin binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #                                                               # ##  ## #   
1AOA_A         26 KYAFVNWINKALEndpdcrhvipmnpntdDLFKAVGDGIVLCKMINLSVPdtiderai-nkkkltpfIIQENLNLALNSA 104  human
6D8C_D         74 QNTFTRWCNEHLKcvsk---------riaNLQTDLSDGLRLIALLEVLSQkkmhrkhn--qrptfrqMQLENVSVALEFL 142  human
3BYH_B          8 ERCYRLWINSLGIdsy-----------vnNVFEDVRNGWILLEVLDKVSPssvnwkhaskppikmpfRKVENCNQVIKIG 76   human
Q9HBI1         90 VKVLLDWINDVLVeeri---------ivkQLEEDLYDGQVLQKLLEKLAGcklnvae----vtqseiGQKQKLQTVLEAV 156  human
Q8IZT6        940 LSRHLGLLGLPVNhvqtpfd--efdfavtNLAVDLQCGVRLVRTMELLTQnwdlskkl-ripaisrlQKMHNVDIVLQVL 1016 human
XP_003289099  156 QTVIIEWINKKLEefgks-------drieNLEGDLKDGCILALLLEGLSGfpinnfn---rnpstkiQIVENNNIILRFL 225  Dictyostelium...
EMD43543       21 LYAYTNFINYIINeep----------fvhNILKDLKDGLVLIRLLRNLSGcdipnsv---enplkdiEKIQNLSAVIQFA 87   Entamoeba his...
EMH74051       25 SKAYKDWLNFINQdep----------hvnDIFTDLRSGLALIKLMEKLTGktldkkyd--knpkdviHERDNIELLIGFM 92   Entamoeba his...
XP_015762745   12 VEVYKAWVNSYLAesgak-------rkinDLAEDLKDGIILCQLIKLTTGhetg----------qseEGIQMVNLVLDYM 74   Acropora digi...
PRP77350      544 NTALAGWTNYVLAprne---------kidNVLKDFQSGVHLISLYEVLSGrsiirhwn--ehpkseeEQLKNIQLALQRF 612  Planoprotoste...
Feature 1                       #####       # ## ##  ##  #
1AOA_A        105 Saig-----chVVNIGAEDLr---aGKPHLVLGLLWQIIK 136  human
6D8C_D        143 Dres-----ikLVSIDSKAIv---dGNLKLILGLIWTLIL 174  human
3BYH_B         77 Kqlk-----fsLVNVAGNDIv---qGNKKLILGLLWQLMR 108  human
Q9HBI1        157 Hdllr--prgwALRWSVDSIh---gKNLVAILHLLVSLAM 191  human
Q8IZT6       1017 KsrgielsdehGNTILSKDIv---dRHREKTLRLLWKIAF 1053 human
XP_003289099  226 Kvlg-----vnLVNITGEDLw---eTRPETMMRMLGIIIK 257  Dictyostelium purpureum
EMD43543       88 Kdd------giKILSSAEEIl---aGDRKGILSFMYQILN 118  Entamoeba histolytica KU27
EMH74051       93 Krn------kvDVRIVAQDIf---dQNKKQILQLFNTLVR 123  Entamoeba histolytica HM-1:IMSS-B
XP_015762745   75 Kdr------gvDITCQVEDIt---sGKLKFILDILWLIIL 105  Acropora digitifera
PRP77350      613 Sn--------eGIQTTKDDArgilhGDEKTTTKLLVDIAK 644  Planoprotostelium fungivorum

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