3LUE,5A36,1TJT,1WKU,2EYI,2R0O,1SJJ,4D1E,5A37,5A4B


Conserved Protein Domain Family
CH_ACTN_rpt1

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cd21214: CH_ACTN_rpt1 
first calponin homology (CH) domain found in the alpha-actinin family
The alpha-actinin (ACTN) family includes alpha-actinin-1, -2, -3, and -4. They are F-actin cross-linking proteins which are thought to anchor actin to a variety of intracellular structures. ACTN1 mutations cause congenital macrothrombocytopenia. ACTN2 mutations are associated with cardiomyopathies, as well as skeletal muscle disorder. ACTN3 is critical in anchoring the myofibrillar actin filaments and plays a key role in muscle contraction. ACTN4 is associated with cell motility and cancer invasion. It is probably involved in vesicular trafficking via its association with the CART complex, which is necessary for efficient transferrin receptor recycling but not for epidermal growth factor receptor (EGFR) degradation. Members of this family contain two copies of the CH domain. This model corresponds to the first CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409063
Aligned: 51 rows
Threshold Bit Score: 157.166
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
actin bindinghomodimer
Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:actin binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #   #                                           #    ###  ##              #
3LUE_K         1 AWEKQQRKTFTAWCNSHLRKAGTqIENIEEDFRNGLKLMLLLEVISGERLPRPD-KGKMRFHKIANVNKALDFIASKGVK 79  human
AAX25958      33 EWELQQKKTFTAWCNAHLRNVNEqINVIENDFQDGLKLMKLLEVISGEQLPKPD-RGKMRFHKIANVNKALDFIESKGVK 111 Schistosoma jap...
P05095        19 AWEITQKKTFTAWCNSHLRKLGSsIEQIDTDFTDGIKLAQLLEVISNDPVFKVNkTPKLRIHNIQNVGLCLKHIESHGVK 98  Dictyostelium d...
XP_001746581  23 QWQRQQQKTFTAWINSHLRKRSLkIEDIAVDLCDGKLLLQLVEIIADETLPKAA-KGKMRIHNVENVGKALNFIQSKGVN 101 Monosiga brevic...
XP_002113237  26 AWERQQRKTFTAWCNSHLRKVDItINEIEQDLRDGLALIKLLEVIASEKLPKPE-KGKMRFHKIANVNKALNFVISKGVK 104 Trichoplax adha...
XP_002731248  31 AWERQQKKTFTAWCNSHLRKAGTaIEDMEEDFRNGLKLMLLLEVISGERLPKPD-RGKMRFHKIANVNKALEFIERKGVK 109 Saccoglossus ko...
CBY42380      34 AWERQQRKTFTAWCNSHLRKAGTgIEAIDVDFRNGLKLMLLLEVISGERLAKPD-RGKMRFHKIANVNKALDFIESKGVR 112 Oikopleura dioica
XP_003386482  22 AWERQQKKTFTAWCNSHLRKVGIqIKEIDQDLRDGMVLLRLLEVISGEKITPREkKVKLRVHKISLLNQALGFIAEKGVK 101 Amphimedon quee...
RMX50068      25 AWERQQKKTFTAWCNSHLRKINVqIDEIDQDFSDGLKLMALLEVISGERLPKPE-KGRLRFHKISNVNKALDFVASKGVK 103 Pocillopora dam...
XP_014160881  22 QWERQQVKSFSAWVNSHLTKAGMaVEDLSEDFKDGKKLIKLVELISNEQLAKPE-KGKMRLHHIQNLNTALKGIEAKNVR 100 Sphaeroforma ar...
Feature 1        ########       # ##  ## ##
3LUE_K        80 LVSIGAEEIVDGNLKMTLGMIWTIIL 105 human
AAX25958     112 LVSIGAEEIVDGNVKMTLGMIWTIIL 137 Schistosoma japonicum
P05095        99 LVGIGAEELVDKNLKMTLGMIWTIIL 124 Dictyostelium discoideum AX4
XP_001746581 102 VSSIAPEEVVDSNLKMILGLVWMLIL 127 Monosiga brevicollis MX1
XP_002113237 105 LVSIGAEEIVDGNRKMTLGMIWTIIL 130 Trichoplax adhaerens
XP_002731248 110 LISIGAEEIVDGNLKMTLGMIWTIIL 135 Saccoglossus kowalevskii
CBY42380     113 LVSIGAEEIVDGNIKMTLGMIWTIIL 138 Oikopleura dioica
XP_003386482 102 LVGIGAEEICDGNLKMTLGMIWTIIL 127 Amphimedon queenslandica
RMX50068     104 LVSIGAEEIVDGNLKMILGMIWTIIL 129 Pocillopora damicornis
XP_014160881 101 LVGTSAEEIADGNMKIILGMIWVLIL 126 Sphaeroforma arctica JP610

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