2IEP


Conserved Protein Domain Family
IgI_1_MuSK

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cd20970: IgI_1_MuSK 
agrin-responsive first immunoglobulin-like domains (Ig1) of the MuSK ectodomain; a member of the I-set of IgSF domains
The members here are composed of the first immunoglobulin-like domains (Ig1) of the Muscle-specific kinase (MuSK). MuSK is a receptor tyrosine kinase specifically expressed in skeletal muscle, where it plays a central role in the formation and maintenance of the neuromuscular junction (NMJ). MuSK is activated by agrin, a neuron-derived heparan sulfate proteoglycan. The activation of MUSK in myotubes regulates the formation of NMJs through the regulation of different processes including the specific expression of genes in subsynaptic nuclei, the reorganization of the actin cytoskeleton and the clustering of the acetylcholine receptors (AChR) in the postsynaptic membrane. The Ig superfamily (IgSF) is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. IgSF domains can be divided into 4 main classes based on their structures and sequences: the Variable (V), Constant 1 (C1), Constant 2 (C2), and Intermediate (I) sets. Unlike the V-set, one of the distinctive features of I-set domains is the lack of a C" strand. The structure of the MuSK lacks this strand and thus it belongs to the I-set of the IgSF. I-set domains are found in several cell adhesion molecules (such as VCAM, ICAM, and MADCAM), and are also present in numerous other diverse protein families, including several tyrosine-protein kinase receptors, the hemolymph protein hemolin, the muscle proteins titin, telokin, and twitchin, the neuronal adhesion molecule axonin-1, and the signaling molecule semaphorin 4D that is involved in axonal guidance, immune function and angiogenesis.
Statistics
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PSSM-Id: 409562
Aligned: 8 rows
Threshold Bit Score: 135.328
Created: 17-Sep-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ####                                                                            
2IEP_A          8 PVITt----pLETVDALVEEVATFMCAVESYPQPEISWTRNKILiklfdtrYSIRen-gQLLTILSVEDSDDGIYCCTAN 82   Norway rat
NP_001024582 4040 DVVQapvisnGGTKQVIEGELAVIECLVEGYPAPQVSWLRNGNRvetgvqgVRYVtd-gRMLTIIEARSLDSGIYLCSAT 4118 Caenorhabditi...
PNJ72567       28 PVITt----pLETVDALVEEVATFMCAVESYPQPEISWTRNKILiklfdtrYSIRen-gQLLTILSVEDSDDGIYCCTAN 102  Pongo abelii
EDL91657       28 PVITt----pLETVDALVEEVATFMCAVESYPQPEISWTRNKILiklfdtrYSIRen-gQLLTILSVEDSDDGIYCCTAN 102  Rattus norveg...
O15394        209 PAISmp--qkSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLiee-nekYILKgs-nTELTVRNIINSDGGPYVCRAT 284  human
NP_571905     207 PVVSvp--qqSFNATADYGESVTFTCRAYGSPEPDVTWHRKGVQlqe-serYVMRar-gTTLTVRNIQQDDGGSYTCRAS 282  Danio rerio
NP_608946     219 SLYShd--crPTDMVVREGSNVTLKCAATGSPEPTITWRRESGVpielatgEEVMsiegTDLVIPNVRRHHMGAYLCIAS 296  Drosophila me...
AAR88551      218 PNIDds--lsSSDVIVREGANISLRCRASGSPRPIIKWKRDDNSriainknHIVNewegDTLEITRISRLDMGAYLCIAS 295  Drosophila me...
Feature 1                        
2IEP_A         83 NgvggaVESCGALQV 97   Norway rat
NP_001024582 4119 Nea-gsAQQAYTLEV 4132 Caenorhabditis elegans
PNJ72567      103 NgvggaVESCGALQV 117  Pongo abelii
EDL91657      103 NgvggaVESCGALQV 117  Rattus norvegicus
O15394        285 Nka-geDEKQAFLQV 298  human
NP_571905     283 Nka-geVEHELFLKV 296  Danio rerio
NP_608946     297 NgvppsVSKRITLVV 311  Drosophila melanogaster
AAR88551      296 NgvpptVSKRIKVSV 310  Drosophila melanogaster

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