2ZJB,1V5W,4HYY


Conserved Protein Domain Family
DMC1

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cd19514: DMC1 
homologous-pairing protein DMC1
DMC1 has a central role in homologous recombination in meiosis. It assembles at the sites of programmed DNA double-strand breaks and carries out a search for allelic DNA sequences located on homologous chromatids. It forms octameric rings.
Statistics
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PSSM-Id: 410922
Aligned: 23 rows
Threshold Bit Score: 445.263
Created: 29-May-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP bindingoligomer
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:contains the Walker A and Walker B motifs

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #######                           #      #           
2ZJB_A       104 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQlpgaggypgGKIIFIDTENTFRPDRLRDIADRFNvD 183 human
ABC61978     103 ITSGSTELDKLLGGGVESMSITEVFGEFRTGKTQLCHTLCVTAQlplsqgggqGKVCFIDTEGTFRPERIPVIAQRFGvD 182 Trichomonas vag...
XP_002784192  98 LSTGSSKVDQLLGGGIESCSITEFYGEFRCGKTQLCHSLSVIAQmpqsygganGKVCYIDTENTFRPDRITQIAQAFGvD 177 Perkinsus marin...
AAP35099      97 ITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQlpshlkggnGKVAYIDTEGTFRPERIAQIAERFGvD 176 Entamoeba histo...
XP_001349356 110 ITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQlpkslnggnGKVCYIDTEGTFRPEKVCKIAERYGlD 189 Plasmodium falc...
CBZ55559     112 ITTGSDQLDQLLGGGFETMSITELFGENRCGKTQICHTVCVTAQlprdmkggcGKVCYIDTEGTFRPEKIQGIAERFGlD 191 Neospora caninu...
NP_594166     95 ISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQlprdmggaeGKVAFIDTEGTFRPDRIKAIAERFGvD 174 Schizosaccharom...
CBX97929     100 ISTGSKALDAVLGGGFQTMSISEVFGEFRCGKTQLSHTMSVIAQlpkdmggadGKVAYIDTEGTFRPERIAQIAERFGvD 179 Leptosphaeria m...
BAA89533     108 ISTGSKLVDGILGGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQlppeyggaaGKVAYIDTEGTFRPDRIRAIADRFGvD 187 Coprinopsis cin...
EES98708     131 LSTGCTDFNTLLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQlpvskggggGKTVYIDTEGTFRPEKVAPIAERFGlN 210 Giardia intesti...
Feature 1                                                                                        
2ZJB_A       184 HDAVLDNVLYARAYTSEHQVELLDYVAAKFHEeagiFKLLIIDSIMALFRvdFSGRGELAERQQKLAQMLSRLQKISEEY 263 human
ABC61978     183 GDEALENILYARAFTHEQQMQLIQAAAAQMAEd--qYRLLIIDSITALFRvdFSGRGELAERQQTLGQMMAALTKLASEF 260 Trichomonas vag...
XP_002784192 178 PQQVLDNIIYARCYNSEHLVQLLLCVAAKMAEe--kYALLVVDSIMGPFRvdFTGRGDLAERQQLLSRVMSRLQKLSEEY 255 Perkinsus marin...
AAP35099     177 QTAVLDNILIARAYTHEQQFDLLIEVAARMAEd--hFRMLIIDSVTSLFRvdFSGRGELSERQQKLGKMMNKLIKISEEF 254 Entamoeba histo...
XP_001349356 190 GEAVLDNILYARAFTHEHLYQLLAISAAKMCEe--pFALLVVDSIISLFRvdFSGRGELSERQQKLNKTMSILSKLSEQF 267 Plasmodium falc...
CBZ55559     192 GDGVLDNIMYARAFTTEHMYQLLTIAAAKMCEe--rFSVLIVDSIIALFRvdFSGRGELADRQQKLNKMLSVMMKLAEQY 269 Neospora caninu...
NP_594166    175 ADQAMENIIVSRAYNSEQQMEYITKLGTIFAEdg-qYRLLIVDSIMALFRvdYSGRGELSERQQKLNIMLARLNHISEEF 253 Schizosaccharom...
CBX97929     180 PDAAQDNITYARAVNSEHQMELLNKVAEFFVGn--eYRLLIIDSIMALFRvdYTGRGELNERQQKLNQFLSKLTHVAEEF 257 Leptosphaeria m...
BAA89533     188 GTMALENILYARAFNSEHQMELINECSARFAEdk-dFRLLIIDSIMALFRvdYSGRGELSERQQKLAQMLSKLTKLSEEF 266 Coprinopsis cin...
EES98708     211 PKKALDNIIVARVYTHEQQIECITALPKLMIEs--qFALVIIDSITALFRvdFTGRGELADRQQKLGQHLAGLAKLADEF 288 Giardia intesti...
Feature 1                                                           #                  ###     
2ZJB_A       264 NVAVFVTNQMTADPGatmt-fqaDPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGD 340 human
ABC61978     261 NIAIFITNQVMASPDsal---fvQAPKPIGGHILAHASTTRLYLRKGKGAERVAKIYDSPSLPEAEASYELSDAGITD 335 Trichomonas vagin...
XP_002784192 256 NLAVVITNQVMADPAaams-faaNPPKPIGGHVLAHYSTTRIALRKGRGEQRIMKIIDSPNLPEGDCVFEICTKGIQD 332 Perkinsus marinus...
AAP35099     255 NVAVVITNQVMSDPGggam-fvvDPKKPIGGHVIAHASTTRLYLRKGKGEQRIVKIYDSPNLPEAEATFAIDTGGIID 331 Entamoeba histoly...
XP_001349356 268 NIAILITNQVMSDPGatmt-fiaNPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKGVID 344 Plasmodium falcip...
CBZ55559     270 NLAVLLTNQVMSDPGgglt-ftaNPTKPVGGHVLGHASTTRLSMRKGKGDQRIVKVYDAPNLPESECIIQLSSKGVID 346 Neospora caninum ...
NP_594166    254 NVAVFVTNQVQADPGaamm-fasNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVITPGGIAD 330 Schizosaccharomyc...
CBX97929     258 NVAVLLTNQVQSDPGasalfagaDGRKPVGGHILAHASATRILLRKGRGEERVAKIQDSPDMPEKEATYIITNGGIND 335 Leptosphaeria mac...
BAA89533     267 NIAVLMTNQVQSDPGatmtfvagGALKPIGGHILSHASATRIFLRKGRAEERVAKLVDSPDRPESEASYKLDEGGWAD 344 Coprinopsis cinerea
EES98708     289 NLAIFVTNQVMAQVDgaam-ftaDPKKPIGGHILAHASTTRLYLRKGRGDTRVAKIYDSPSLAEGEASYSIAAEGIID 365 Giardia intestina...

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