Conserved Protein Domain Family
KH_I_FXR1_rpt1

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cd22504: KH_I_FXR1_rpt1 
first type I K homology (KH) RNA-binding domain found in fragile X mental retardation syndrome-related protein 1 (FXR1) and similar proteins
FXR1 is an RNA-binding protein required for embryonic and postnatal development of muscle tissue. It may regulate intracellular transport and local translation of certain mRNAs. FXR1 protein may be present in amyloid form in brain of different species of mammals. It may regulate memory and emotions. FXR1 contains three K-homology (KH) RNA-binding domains. The model corresponds to the first one. Members in this subfamily contain a divergent KH domain that lacks the RNA-binding GXXG motif.
Statistics
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PSSM-Id: 411932
Aligned: 6 rows
Threshold Bit Score: 146.169
Created: 13-Aug-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P51114       123 KNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSAsEATVKRVNILSDMHLRSIRTKLMLM 199 human
XP_005991965 123 KSTFFKCTVAVPEDIKDVCANENAHKDFKKAIGACRIFYCAEENQLVILSTnEATVKRVSMLSDMHLRSIRTKIMLM 199 coelacanth
NP_001012619 123 KNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLIILSAsEATVKRVNILSDMHLRSIRTKLMLM 199 chicken
XP_007905956 123 KNTFFKCTVEVPDDLKEACANENIHKDFKKATEADCIFYSPESGQLVALSTkEATVKRVSILSDMHLRSIRTKLMLV 199 elephant shark
Q7ZTQ5       123 KNSFFKCTVDVPEDLRESCSNENVHKEFKKAVGACRVYFHAETNQLIILSAsESTVKRVNILSDMHLRSIRTKLMLM 199 African clawed frog
NP_001299810 123 ESTFFRCSVPVPEDLRAACESEQAHKEFKKAVGAIRIVYSPEKSELVVLSLsEATVKRVSLLSDIHLRSIRTKLMLM 199 zebrafish
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