Conserved Protein Domain Family
RING-HC_DTX3-like

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cd16506: RING-HC_DTX3-like 
RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3), Deltex-3-like (DTX3L) and similar proteins
This subfamily contains Deltex3 (DTX3) and Deltex-3-like (DTX3L), both of which are E3 ubiquitin-protein ligases belonging to the Deltex (DTX) family. DTX3, also known as RING finger protein 154 (RNF154), has a biological function that remains unclear. DTX3L, also known as B-lymphoma- and BAL-associated protein (BBAP) or Rhysin-2 (Rhysin2), regulates endosomal sorting of the G protein-coupled receptor CXCR4 from endosomes to lysosomes. It also regulates subcellular localization of its partner protein, B aggressive lymphoma (BAL), by a dynamic nucleocytoplasmic trafficking mechanism. In contrast to other DTXs, both DTX3 and DTX3L contain a C3HC4-type RING-HC finger, and a previously unidentified C-terminal domain. DTX3L can associate with DTX1 through its unique N termini and further enhance self-ubiquitination.
Statistics
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PSSM-Id: 438169
Aligned: 12 rows
Threshold Bit Score: 81.6414
Created: 22-Feb-2016
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #            # #  #  #           #  #    
Q8N9I9        162 STCPICLGEiqnaKTLEKCRHSFCEGCITRALq-vKKACPMCGRFY 206  human
Q8TDB6        559 GICVICMDTisnkKVLPKCKHEFCAPCINKAMs-yKPICPTCQTSY 603  human
NP_956822     105 TVCSICMGEmvekTTLDKCGHAFCRSCLEQAFq-vKKACPVCRLVY 149  zebrafish
NP_001106359   34 EMCPICLSGfknkKTLDKCKHSFCEDCISRALq-vKKACPMCGCLY 78   African clawed frog
KFO76637      148 RQCPICLGEiqkmKTLEKCRHSFCEDCITRALq-vKTACPMCGRFY 192  common cuckoo
XP_005986230  110 DNCPICLGDieakKTLEKCGHSFCEDCLNQALk-iKSTCPLCKEFY 154  coelacanth
XP_013409531  527 ETCPICMDSfqnkTTLDRCKHSFCKDCLDRSLq-lKNKCPICGDIL 571  Lingula anatina
XP_007890397  263 KTCPVCLDEinerETLKKCKHSFCRECIKAAFr-vKSACPICGEVY 307  elephant shark
ETE73785      690 ECCPICLNKiyqkKVLPKCKHAFCEACIGTAMn-yKPVCPVCNVVY 734  king cobra
XP_018091087  515 DKCPVCLCEphpkLVLKKCKHVICAGCWEQAMk-hKPVCPVCNVIY 559  African clawed frog
XP_002742351 1103 LECPICMERvsdpKMLQDCQHTFCRACIDRALk-dKPVCPVCGLIY 1147 Saccoglossus kowalevskii
XP_013403375 1512 DACVICMDPmvnpKRLEKCGHVFCTSCIDKSFrlsKPVCPTCGTVY 1557 Lingula anatina

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