2LEF


Conserved Protein Domain Family
HMG-box_TCF7-like

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cd21996: HMG-box_TCF7-like 
Click on image for an interactive view with Cn3D
high mobility group (HMG)-box found in the transcription factor 7 (TCF-7)-like family
The TCF7-like family includes TCF-7, TCF7-like 1 (TF7L1), lymphoid enhancer-binding factor 1 (LEF-1), and similar proteins. TCF-7, also called T-cell-specific transcription factor 1, or T-cell factor 1 (TCF-1), is a T lymphocyte-specific transcriptional activator involved in T-cell lymphocyte differentiation. It is necessary for the survival of CD4(+) CD8(+) immature thymocytes. It binds to the T-lymphocyte-specific enhancer element (5'-WWCAAAG-3') found in the promoter of the CD3E gene. TF7L1, also called HMG box transcription factor 3 (TCF-3), participates in the Wnt signaling pathway. It binds to DNA and acts as a repressor in the absence of CTNNB1, and as an activator in its presence. TF7L2, also called HMG box transcription factor 4, or T-cell-specific transcription factor 4, or T-cell factor 4, or TCF-4, participates in the Wnt signaling pathway and modulates MYC expression by binding to its promoter in a sequence-specific manner. It acts as a repressor in the absence of CTNNB1, and it activates transcription from promoters with several copies of the TCF motif 5'-CCTTTGATC-3' in the presence of CTNNB1. LEF-1, also called T cell-specific transcription factor 1-alpha (TCF1-alpha), is a transcription factor that binds DNA in a sequence-specific manner. It may participate in the Wnt signaling pathway. All family members contain one HMG-box domain.
Statistics
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PSSM-Id: 438812
Aligned: 56 rows
Threshold Bit Score: 146.325
Created: 8-Apr-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
DNA binding
Conserved site includes 38 residues -Click on image for an interactive view with Cn3D
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # ########  ##  #         ####  ##  #              #   #  #          ###########
2LEF_A          2 HIKKPLNAFMLYMKEMRANVVAestlKESAAINQILGRRWHALSreEQAKYYELARKERQLHmQLYPGWSARDNYGKKKK 81   house mouse
NP_001245405  272 HIKKPLNAFMLYMKEMRAKVVAectlKESAAINQILGRRWHALGreEQAKYYELARRERQLHmQMYPDWSSRTNASRGKK 351  fruit fly
AAD45010      315 HIKKPLNAFMLYMKEMRASVVKectlKESAAINQILGRRWHALTreEQAKYYELARKERQLHmQLYPGWSARDNYAIHGK 394  purple sea ur...
PIK51010      295 HIKKPLNAFMLYMKEMRASVVKectlKESAAINQILGRRWHALSreEQAKYYELARKERQLHmQLYPGWSARDNYATACR 374  Japanese sea ...
NP_999640     315 HIKKPLNAFMLYMKEMRASVVKectlKESAAINQILGRRWHALTreEQAKYYELARKERQLHmQLYPGWSARDNYAIHGK 394  purple sea ur...
XP_026288780   32 HIKKPLNAFMLYMKEMRQQVVSectlKESAAINQILGRRWHALSreEQARYYELARKERQLHmQLYPDWSSRANTTRGKK 111  western flowe...
Q8IMA8        713 HIKKPLNAFMLYMKEMRAKVVAectlKESAAINQILGRRWHELSreEQSKYYEKARQERQLHmELYPGWSARDNYGYVSK 792  fruit fly
TRY63071      358 HIKKPLNAFMLYMKEMRPKIVAectlKESAAINQILGRRWHGLSrdEQAKYYELARKERQLHmQLYPGWSARDNYAQSKK 437  Tigriopus cal...
EMP41602       91 TIKKPLNAFMLYMKEMRAKVIAectlKESAAINQILGRRWHALSreEQAKYYELARKERQLHmQLYPGWSARDNYPVVEY 170  Green sea turtle
TKS89681      200 HIKKPLNAFMLYMKEMRAKVVAectlKESAAINQILGRRWHALSreEQAKYYELARKERQLHmQAVPRLVSTRQLYANTP 279  big head croaker
Feature 1         #####
2LEF_A         82 RKREK 86   house mouse
NP_001245405  352 RKRKQ 356  fruit fly
AAD45010      395 KKKKK 399  purple sea urchin
PIK51010      375 RRKKR 379  Japanese sea cucumber
NP_999640     395 KKKKK 399  purple sea urchin
XP_026288780  112 RKRKQ 116  western flower thrips
Q8IMA8        793 KKKRK 797  fruit fly
TRY63071      438 KKRKR 442  Tigriopus californicus
EMP41602      171 QSAYD 175  Green sea turtle
TKS89681      280 KKCRA 284  big head croaker

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