Conserved Protein Domain Family
MutL_Trans_MLH1

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cd03483: MutL_Trans_MLH1 
MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Statistics
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PSSM-Id: 239565
Aligned: 20 rows
Threshold Bit Score: 183.59
Created: 21-Feb-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
ATP binding
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:By similarity to Escherichia coli MutL
  • Comment:conserved Lys residue from the transducer domain interacts with the gamma-phosphate of bound nucleotide.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
P40692    211 STVDNIRSIFGNAVSRELIEIGcedk-------------tlaFKMNGYISNANYs-vKKCIFLLFINHRLVESTSLRKAI 276 human
EAL20543  235 NTKANIAALYTSALANELLEIPeselq----------parlgAKLKGWVSNANSswsKKGGWLLFINNRLVDSNKLKKAV 304 Cryptococcus neofo...
AAS53175  252 SKSDKIRAVFGAPVVANLVEVDisadp-----------ehglTSSSGQITTPDFnnkKSIPAVFFINNRLVSCDPLRRAL 320 Ashbya gossypii AT...
XP_453504 208 STKDRVRIVFGANVSTNLMELNiditdd--------vqrnglLSASGFVTNLDFtnkKPIPPAFFINGRLVSCDPMRRSF 279 Kluyveromyces lact...
XP_761355 237 STLDTIRILHGNAVARELVELNdvsd------------dqlgFQCHGWISGANWs-sKRTTLLCFINNRLVECPLLKRSI 303 Ustilago maydis 521
XP_501666 201 SKRDRIRVVYGSRVSGSLVEVEddtdnadesvistlsniglsRAPELLISNPNYs-nTKSTFIIFINNRLVSCEPIRKAL 279 Yarrowia lipolytic...
P38920    208 TVQDRIRTVFNKSVASNLITFHiskve-----------dlnlESVDGKVCNLNFiskKSISPIFFINNRLVTCDLLRRAL 276 baker's yeast
CAG91011  222 TLTERIRTVFGPAVANELIDVEikgnetvee---dyqgkyglVRVSGAITNSNYnnkKKIQPVFFINHRLVTCEPLKRAI 298 Debaryomyces hanse...
CAG59228  207 TTIDRIRSIYGNNVATSIIGFEmdsne-----------nlglTKVSGYISTSNLnnkKSVQPIFFINDRLVTCDPLRRAI 275 Candida glabrata C...
XP_962522 241 SSTDRIRQIYGGSVANELIEYStsdd-------------rwgFKAQGLATNANYs-lKKTTLLLFINHRCVESSNIRKAV 306 Neurospora crassa ...
Feature 1                                       #                        
P40692    277 ETVYAAYLPKnthPFLYLSLEISPqnVDVNVHPTKHEVHFLHEESILERVQQHIESKLL 335 human
EAL20543  305 EGHYTSYLPKgasPWAYLSLQIDPakIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALE 363 Cryptococcus neoformans var. neoformans...
AAS53175  321 SQVYSNFLPKgnkPFIYMSLHITPenVDVNVHPTKREVRFLYEEELIERIGNLLHERLS 379 Ashbya gossypii ATCC 10895
XP_453504 280 YQIYSNFLPKgnkPFIYFSLTIKPqnVDVNIHPTKREVRFLNEEEIIDRLAILLQDKLA 338 Kluyveromyces lactis NRRL Y-1140
XP_761355 304 EALYATLLPKgghPWVYLSITINPanVDVNVHPTKKEVHFLHQDEIVELICQAAQKRLA 362 Ustilago maydis 521
XP_501666 280 VAVYSRYLPTkafPFVYLSLFIDPenLDVNVHPTKQEVRFLHQAEIVDFLSNLVDDTLS 338 Yarrowia lipolytica CLIB122
P38920    277 NSVYSNYLPKgnrPFIYLGIVIDPaaVDVNVHPTKREVRFLSQDEIIEKIANQLHAELS 335 baker's yeast
CAG91011  299 SSIYQFFLPKgtqPFMYLSLEIEPqnLDVNVHPTKREVRFLYEDEIIEIISSKVHQLLS 357 Debaryomyces hansenii CBS767
CAG59228  276 YNTYTNYLPKgtrPFIYLSINISPpsVDVNVHPTKREVRFLHQDEIIDEITTSINDQLS 334 Candida glabrata CBS138
XP_962522 307 EQTYASFLPKnghPFVYLSLEIAPerVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLA 365 Neurospora crassa N150

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