1F6D,1O6C,1V4V,5DLD,4HWG


Conserved Protein Domain Family
GTB_UDP-GlcNAc_2-Epimerase

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cd03786: GTB_UDP-GlcNAc_2-Epimerase 
Click on image for an interactive view with Cn3D
UDP-N-acetylglucosamine 2-epimerase and similar proteins
Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Statistics
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PSSM-Id: 340819
Aligned: 72 rows
Threshold Bit Score: 260.604
Created: 8-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitehomodimer
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                #                                                                       
1F6D_A         2 KVLTVFGTRPEAIKXAPLVHALAkdp-ffEAKVCVTAQHReXLDQVLKLf------sIVPDYDLNIxqpgqglTEITCRI 74  Escherichia coli
NP_273134      3 RILCITGTRADFGKLKPLLAYIEnhp-dlELHLIVTGMHMmKTYGRTYKevtrenyqHTYLFSNQIqg---epMGAVLGN 78  Neisseria menin...
AAM76278       5 KICIVSATRAEWYLLRNLCLEIQndk-dlELQIIATGAHLsPEFGLTYKeiek-efkIAKKIPILLasddkisLCKAMAL 82  Campylobacter coli
AAH63958      13 RVCVATCNRADYSKLAPIMFGIKshpdifDLEVVVLGSHLiDDYGNTFRmieqddfdIGSKLHTIVrgedeaaMVESVGL 92  zebrafish
AAS59258      11 RVCVATCNRADYSKLAPIMFGIKtepeffELDVVVLGSHLiDDYGNTYRmieqddfdINTRLHTIVrgedeaaMVESVGL 90  human
EAN08847       3 KILIVSGTRADYGIYKPVAENLLqd--nwDVSFVVSGMHLsHKYGFTKEliladgfrISGEVQSLFlennkgnMARSVAL 80  Enterococcus fa...
YP_429616      3 KIMAFTATRAEYGLLKPILRGIKqsp-klELSLVVAGEHLvQWKGNTINeikrdgfnISEIINSSLasdrteaIIKSVGL 81  Moorella thermo...
CAM76641       6 RICVFTATRAEYGLLRWVMQDLKddp-svELQVLVSGSHLsPQFGDTWKsltedgfdPILKVEMLLdsdsavgAATSMGL 84  Magnetospirillu...
EDP94261       5 KICAVVTARPSYSRIKTALKAIQehp-nlELQLVVAGSALlGRYGNAVNviekdgfkIDEKVFMVLegenptaMAKTTGL 83  Kordia algicida...
YP_002248325   5 KLLFITGSRGEWGYIRPILRLCNkrk-dvNFSLCVTNMHLlPDFGLSIKeierdgfhVDYKIYMSLdgynhytMVKSLGV 83  Thermodesulfovi...
Feature 1                                                                                        
1F6D_A        75 LEGLKPILAEf-kPDVVLVHGDTtTTLATSLAAFYqRIPVGHVEAGLrtgdlySPWPEEANRTLTGhlaXYHFSPteTSR 153 Escherichia coli
NP_273134     79 TITFISRLSDeiePDMVMIHGDRlEALAGAAVGALsSRLVCHIEGGEls---gTVDDSIRHSISKLs--HIHLVAneQAV 153 Neisseria menin...
AAM76278      83 ANIGFSEAFEslkPDIVVILGDRyEMLSVASVCLMmNLPIAHLCGGElt--lgAIDDSIRHSISKMa--HLHFVStqTYK 158 Campylobacter coli
AAH63958      93 ALVKLPDVLQrlaPDILLVHGDRfDALALATAAALmNIRILHLEGGEvs---gTIDDSIRHAISKLa--HYHAVCtlSAE 167 zebrafish
AAS59258      91 ALVKLPDVLNrlkPDIMIVHGDRfDALALATSAALmNIRILHIEGGEvs---gTIDDSIRHAITKLa--HYHVCCtrSAE 165 human
EAN08847      81 EINGFTNIFEqtsPDFVLLLGDRgEMLAAAIACLYlGIKTAHIHGGEvs---gTVDESIRHAITKIa--SVHFAAteKSK 155 Enterococcus fa...
YP_429616     82 TTILLSDTIRkvePDFLLLLGDRyELFAPAIAALIqRIPIAHIAGGEtt--ygVLDEQVRHAITKMa--HLHFPTtwEYG 157 Moorella thermo...
CAM76641      85 GVMKYADALVslrPHLVVVLGDRyEVLAMAAAATCmGVPIAHIHGGEat--egAIDDSLRNAVTALa--HLHFPTaaEYA 160 Magnetospirillu...
EDP94261      84 GVMELSNVFYnlkPDAVITIADRfETIATSIAAAYqNIPLVHIQGGEvt---gNIDEKVRHANTKLa--DLHLVAseDAK 158 Kordia algicida...
YP_002248325  84 FLSSLADVVAstkPDWIILAGDRgEQLMGAIVGAFcYIPVAHIQAGEls---gNIDGMTRHAIGKYa--HLHFASneDAA 158 Thermodesulfovi...
Feature 1                                                                                        
1F6D_A       154 QNLLREnVADSRIFITGNTVIDALLWVRDqvxssdklrselaanypfidpdkKXILVTGHRREsf-----gRGFEEICHA 228 Escherichia coli
NP_273134    154 TRLVQMgEKRKHIHIIGSPDLDVMASSTLpsleevke--------yyglpyeNYGISMFHPVTteah-lmpQYAAQYFKA 224 Neisseria menin...
AAM76278     159 NRLLQLgEEKNRVFNVGSLASTIMKNINFldknelak-------vlefdlgqNIYLITYHPVTlnlk-nskKEIDILLKT 230 Campylobacter coli
AAH63958     168 RHLISMcEDHSRILLAGCPSYDKLLSAYKrddyadiiks----wigddvkeqDYIVALQHPVTtdik-nsiKIYELMLDA 242 zebrafish
AAS59258     166 QHLISMcEDHDRILLAGCPSYDKLLSAKNkdymsiilm-----wlgddvkskDYIVALQHPVTtdik-hsiKMFELTLDA 239 human
EAN08847     156 ERLIKMgEDSWRVFPVGAPRIDTILNNRLpsfrdikek------yhlkfekkKYVLQVFHPVVtele-nieKQILALINS 228 Enterococcus fa...
YP_429616    158 WRIRQMgEEAWRIHVVGSPGIENINNCDYmlpnelee-------dfginlekPIILVTYHPETlekgyqapKDIEQLVRA 230 Moorella thermo...
CAM76641     161 GRIRQMgVAPERIFQVGAPALDNLQRLALldrdllav-------elgmdlnaPLLMVTYHPVSvnhd-dpaGGIDVLLQA 232 Magnetospirillu...
EDP94261     159 DRVVKLgEDPAYVINTGCPSIDIAKEVLEnnnyefdpikkyggvgadldisnGYLVVMQHPETnryk-sarEDVLCTLEA 237 Kordia algicida...
YP_002248325 159 ERLIKLgEEPFRIHIVGAPQLDELVQGLYtkrdnlfn--------kyslnlqNYLLVMLHPVTeeyh-kasEQVEILMRA 229 Thermodesulfovi...
Feature 1                                                       # #  #                #   #      
1F6D_A       229 LADIAtthqdiQIVYPVHln--pNVREPVNrilg---hvknVILIDPQEYlPFVWLXnhAWLILTDSG-GIQEEAPSlgK 302 Escherichia coli
NP_273134    225 LELSGqn---iISIYPNNdtgteSILQELLkyqs----dkfIAFPSIRFEyFLVLLKh-AKFMVGNSSaGIREAPLYg-V 295 Neisseria menin...
AAM76278     231 LDELNna--slIFTKANAdenglLINEILKdycek-npkkaKLFDNLGSQkYLSIMKi-AKAMIGNSSsGISESPFFk-T 305 Campylobacter coli
AAH63958     243 LISFNkk---tLILFPNIdagskEMVRVMRrkgie-qhqnfRAVKHVPFDqFIQLVAh-AVCMIGNSScGVREAGAFg-T 316 zebrafish
AAS59258     240 LISFNkr---tLVLFPNIdagskEMVRVMRkkgie-hhpnfRAVKHVPFDqFIQLVAh-AGCMIGNSScGVREVGAFg-T 313 human
EAN08847     229 MEQQSqp---iICILPNSdagseIIRKMYQkylk----tdiIYITNLEPEeYLTILKe-CKFMIGNSSsGIIEAASFk-I 299 Enterococcus fa...
YP_429616    231 LKHFSgh--qqVITYPGTevgyqNIIEAWQqyaad--rpnvILKKSLGSRgYLGVMRl-ASVVVGNSSsGIIEAPSFh-V 304 Moorella thermo...
CAM76641     233 LEHFPdt--riLLSGANQdaggrAINARLEafaar-nprhiRLVTSLGSRrYLSVLKh-AAVVLGNSSsGIIEAPACg-T 307 Magnetospirillu...
EDP94261     238 VHELNip---tFWFWPNVdagsdGTSNGIRyyrenfnpeniRFFKNMEPNdFLHLLKn-CDCLVGNSSvGIRECSFIg-V 312 Kordia algicida...
YP_002248325 230 LSKFDmp---kIVILPNNdagslMIREGIEnnrk----gdfYVFSNLSREdYLGFLKy-CSAIVGNSSsGILEAPTFk-I 300 Thermodesulfovi...
Feature 1                                                                               
1F6D_A       303 PVLVXRdtterpeavtaGTVRLVgtdkqRIVEEVTRLLkdeneyqaxsr---ahnpygdgqaCSRILEALK 370 Escherichia coli
NP_273134    296 PSIDVGtrqsnrhmgksIIHTDYet--kNIFDAIQQACslgkfead--------dtfnggdtRTSTERFAE 356 Neisseria meningitidis MC58
AAM76278     306 PCINIGsrqkgrlrtqnIIDCEFe----NLDQAFEKLEskdfkqalhh----fknpyendknPNIIIKTCL 368 Campylobacter coli
AAH63958     317 PVINLGtrqtgretgenVLHVRDadthnKIYHALELQFgkrypcsk---------iygdgnaVQRILKFLQ 378 zebrafish
AAS59258     314 PVINLGtrqigretgenVLHVRDadtqdKILQALHLQFgkqypcsk---------iygdgnaVPRILKFLK 375 human
EAN08847     300 PVINLGtrqngreqsknIINANLne--nEIETALNKIQdpqfikslkn----vkniygdgnsSRRITKTLN 364 Enterococcus faecium DO
YP_429616    305 PTVNIGerqkgriradsIIDVPCee--kEIVKGIKKALedrdfrqslkdvfnpydpygdsnaSGRIVKVLE 373 Moorella thermoacetica A...
CAM76641     308 AVVNVGprqngrlraasVIDCAEda--eAVITAIKRAMsdefqavakl----gqtpygqpggCSVIAQTLA 372 Magnetospirillum gryphis...
EDP94261     313 PTVNIGtrqnrrqrgknVVDAEYnk--eAIKTAIQERIgqkgmlse--------hiygngnsGKQIADALA 373 Kordia algicida OT-1
YP_002248325 301 PAVNIGrrqhkrlrgnnVIDVDFee--eAIISAIKKAIskefremlknn---ctnpygdgksSERILNILI 366 Thermodesulfovibrio yell...

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