Conserved Protein Domain Family
Ig4_L1-NrCAM_like

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cd04978: Ig4_L1-NrCAM_like 
Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)
The members here are composed of the fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.
Statistics
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PSSM-Id: 409367
Aligned: 7 rows
Threshold Bit Score: 119.476
Created: 22-Feb-2007
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Feature 1:Ig strand B [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                        #####                                                         
AAH72835   351 YWISPPTNIVLs--pGEDGSLICRASGNPTPSITWLINGVSielaptd--asrrvdgDTIIFskvqd-gataVYQCNVSN 425  African clawed frog
1171701    328 YWVRRPQSGVFg--pGETARLDCEVGGKPRPQIQWSINGVPieaagae---rrwlrgGALVLpelrp-ndsaVLQCEARN 401  chicken
462740     338 YWITAPRNLVLs--pGEDGTLICRANGNPKPSISWLTNGVPiaiaped--psrkvdgDTIIFsavqe-rssaVYQCNASN 412  chicken
AAC47654   334 RWKDNKPPEDVntsdEETAVFKCGVEGIPRPTVEWMLNKRPledlppnprmrmnderTVLTFsnvss-kdiqVIQCNASN 412  medicinal leech
ABQ57414   330 FWEFDPPRDISlp-eESTGELECLAGGQPTPIITWSMNGKFlhelaedsrrvlldhgRILRVrnlnhdldtgVYQCNASN 408  nematode
NP_477404  133 QVLIEPSDLTEqr-iGAIFEVVCEAQGVPQPVITWRLNGNViqpqs------ntgnrQSLILeiksr-nqagLIECVASN 204  fruit fly
O00533     332 RWTKKPQSAVYs--tGSNGILLCEAEGEPQPTIKWRVNGSPvdnhpfa---gdvvfpREISFtnlqp-nhtaVYQCEASN 405  human
Feature 1                     
AAH72835   426 k-yGYLLANAFVNVL 439  African clawed frog
1171701    402 r-hGPLLANAFLHVV 415  chicken
462740     413 e-yGYLLANAFVNVL 426  chicken
AAC47654   413 v-hGYILANAYLNVF 426  medicinal leech
ABQ57414   409 p-lGYVFANAFVHVR 422  nematode
NP_477404  205 gvgEPAVANVYLHVL 219  fruit fly
O00533     406 v-hGTILANANIDVV 419  human

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