6O3O,4FRW,3U83


Conserved Protein Domain Family
IgC1_2_PVR_like

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cd05719: IgC1_2_PVR_like 
Second immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155 and Necl-5), and similar domains; member of the C1-set of Ig superfamily (IgSF) domains
The members here are composed of the second immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155 and nectin-like protein 5 (Necl-5)) and similar proteins. Poliovirus (PV) binds to its cellular receptor (PVR/CD155) to initiate infection. CD155 is a membrane-anchored, single-span glycoprotein; its extracellular region has three Ig-like domains. There are four different isotypes of CD155 (referred to as alpha, beta, gamma, and delta), these result from alternate splicing of the CD155 mRNA, and have identical extracellular domains. CD155-beta and CD155-gamma are secreted, while CD155-alpha and CD155-delta are membrane-bound and function as PV receptors. The virus recognition site is contained in the amino-terminal domain, D1. Having the virus attachment site on the receptor distal from the plasma membrane may be important for successful initiation of infection of cells by the virus. CD155 binds in the poliovirus "canyon" and has a footprint similar to that of the intercellular adhesion molecule-1 receptor on human rhinoviruses. This group also includes the second Ig-like domain of nectin-1, also known as poliovirus receptor related protein(PVRL)1 or CD111.
Statistics
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PSSM-Id: 409384
Aligned: 9 rows
Threshold Bit Score: 131.461
Created: 18-Sep-2007
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #######                                                                         
6O3O_C    120 PQNTAEVQkvql-----tgepVPMARCVSTgGRPPAQITWHSDLGGMPNTSQVPgflsgTVTVTSLWILVPSSQVDGKNV 194  human
4FRW_A    118 PLPSLNPGpalee----gqglTLAASCTAE-GSPAPSVTWDTEVKGTTSSRSFKhs--rSAAVTSEFHLVPSRSMNGQPL 190  human
3U83_A    131 PTNWIEGTqavlrakkgqddkVLVATCTSAnGKPPSVVSWETRLKGEAEYQEIRnp-ngTVTVISRYRLVPSREAHQQSL 209  human
Q92692    162 PKNQAEAQkvtf-----sqdpTTVALCISKeGRPPARISWLSSLDWEAKETQVSgtlagTVTVTSRFTLVPSGRADGVTV 236  human
P15151    145 PQNTAEVQkvql-----tgepVPMARCVSTgGRPPAQITWHSDLGGMPNTSQVPgflsgTVTVTSLWILVPSSQVDGKNV 219  human
Q96NY8    149 PLPSLNPGpalee----gqglTLAASCTAE-GSPAPSVTWDTEVKGTTSSRSFKhs--rSAAVTSEFHLVPSRSMNGQPL 221  human
Q15223    146 PTNWIEGTqavlrakkgqddkVLVATCTSAnGKPPSVVSWETRLKGEAEYQEIRnp-ngTVTVISRYRLVPSREAHQQSL 224  human
XP_417892 611 PTNRMEGTtrpliaksgrtekILVATCISSnGKPPSTVTWDTKLKGEAEFQEIRns-ngTFTVISRYRLVPSREAHRQQL 689  chicken
Q9NQS3    170 PTVSLIKGpdsli---dggneTVAAICIAAtGKPVAHIDWEGDLGEMESTTTSFpn--eTATIISQYKLFPTRFARGRRI 244  human
Feature 1                          
6O3O_C    195 TCKVEHESfeKPQLLTVNLTV 215  human
4FRW_A    191 TCVVSHPGllQDQRITHILHV 211  human
3U83_A    210 ACIVNYHM--DRFKESLTLNV 228  human
Q92692    237 TCKVEHESfeEPALIPVTLSV 257  human
P15151    220 TCKVEHESfeKPQLLTVNLTV 240  human
Q96NY8    222 TCVVSHPGllQDQRITHILHV 242  human
Q15223    225 ACIVNYHM--DRFKESLTLNV 243  human
XP_417892 690 MCVVNYQL--DRFTDSITLNV 708  chicken
Q9NQS3    245 TCVVKHPAleKDIRYSFILDI 265  human

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