5ZO2


Conserved Protein Domain Family
IgI_2_Necl-1-4

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cd05761: IgI_2_Necl-1-4 
Second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 - Necl-4; member of the I-set of Ig superfamily domains
The members here are composed of the second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 (also known as cell adhesion molecule 3 or CADM3), Necl-2 (also known as CADM1), Necl-3 (also known as CADM2) and Necl-4 (also known as CADM4). These nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 through Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 and Necl-2 have Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue and is important to the formation of synapses, axon bundles, and myelinated axons. Necl-2 is expressed in a wide variety of tissues, and is a putative tumour suppressor gene, which is downregulated in aggressive neuroblastoma. Necl-3 has been shown to accumulate in tissues of the central and peripheral nervous system, where it is expressed in ependymal cells and myelinated axons. It is observed at the interface between the axon shaft and the myelin sheath. Necl-4 is expressed on Schwann cells, and plays a key part in initiating peripheral nervous system (PNS) myelination. Necl-4 participates in cell-cell adhesion and is proposed to play a role in tumor suppression.
Statistics
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PSSM-Id: 409418
Aligned: 10 rows
Threshold Bit Score: 151.427
Created: 18-Sep-2007
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ####                                                                            
5ZO2_A        97 LVAPENPVVEVReqa-vegGEVELSCLVPRSRPAAVLRWYRDRKELK-GVSSGQENg---kVWSVASTVRFRVDRKDDGG 171 house mouse
NP_001091987 141 LVPPRNLMIDIQkdtavegEEIEVNCTAMASKPATTIRWFKGNTELK-GKSEVEEWs---dMYTVTSQLMLKVHKEDDGV 216 human
NP_001038711 138 LGVPGKPVITGFegavqegGKVTLTCTSSGGKPPAKLHWYRDHVEIQ-GRPDVVESnpnepTYTVTSELTLSVSRDDNDA 216 zebrafish
AAH33819     127 LGIPQKPIITGYksslrekDTATLNCQSSGSKPAARLTWRKGDQELHgEPTRIQEDpn-gkTFTVSSSVTFQVTREDDGA 205 human
Q6DJ83       121 LGVPENPHISGFtspvmegDTIQLTCKSSGSKPAADIRWFKNDQEIT-DVQKIQQQdsngkTFTVTSSLVFQGDRKDDGA 199 western clawed ...
XP_416672     13 LGVPEKPQITGFtspvmegERMQLTCKTSGSKPAADIRWFKNDKEVK-DVKYLKEEdanrkTFTVSSTMDFLADRNDDGA 91  chicken
CAH56314      17 LGVPEKPQISGFsspvmegDLMQLTCKTSGSKPAADIRWFKNDKEIK-DVKYLKEEdanrkTFTVSSTLDFRVDRSDDGV 95  human
AAN16368     123 LGVPEKPQISGFsspvmegDLMQLTCKTSGSKPAADIRWFKNDKEIK-DVKYLKKEdanrkTFTVSSTLDFRVDRSDDGV 201 human
NP_956958    136 LGVPKKPEINGLtkpvlegDHITLTCVTSGSKPAADVRWFKNEMEVK-GAKEVNASg---kTFTVKSSLRLHVNRDDDGV 211 zebrafish
AAI52657     136 LGVPKKPEINGLtkpvlegDHITLTCVTSGSKPAADVRWFKNEMEVK-GAKEVNASg---kTFTVKSSLRLHVNRDDDGV 211 Danio rerio
Feature 1                                 
5ZO2_A       172 IVICEAQNQALpsghsKQTQYVLDV 196 house mouse
NP_001091987 217 PVICQVEHPAVtg--nLQTQRYLEV 239 human
NP_001038711 217 LIACAVDHPSIan-gdKRTEQPLNV 240 zebrafish
AAH33819     206 SIVCSVNHESLkg-adRSTSQRIEV 229 human
Q6DJ83       200 VIRCRVDHESLts-tpQIAKQVLEI 223 western clawed frog
XP_416672     92 VISCRVDHESLns-tpQIAMQVLEI 115 chicken
CAH56314      96 AVICRVDHESLna-tpQVAMQVLEI 119 human
AAN16368     202 AVICRVDHESLnt-tpQVAMQVLEI 225 human
NP_956958    212 AYTCRVDHVALta-thEETTQVLEV 235 zebrafish
AAI52657     212 AYTCRVDHVALta-thEETTQVLEV 235 Danio rerio

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