4MLC,4Q6B


Conserved Protein Domain Family
PBP1_ABC_HAAT-like

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cd06344: PBP1_ABC_HAAT-like 
Click on image for an interactive view with Cn3D
type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of hydrophobic amino acids or peptides
This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in the uptake of hydrophobic amino acids or peptides. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.
Statistics
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PSSM-Id: 380567
Aligned: 27 rows
Threshold Bit Score: 326.49
Created: 11-Jan-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand binding
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:4Q6B; Desulfitobacterium hafniense ABC transporter substrate-binding protein binds leucine, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
4MLC_A     10 EIFIGVAWpf--asLDDLFAEGLELAVQEINeqg-gvqGRKLSLVKADDea---------elEKGLAIAQAFADnaGIQA 77   Desulfitobacteriu...
4Q6B_A     10 EIFIGVAWpf--asLDDLFAEGLELAVQEINeqg-gvqGRKLSLVKADDea---------elEKGLAIAQAFADnaGIQA 77   Desulfitobacteriu...
CAM75124   50 HLAVVFSPd----eDADDFLAGTRIAVEQVNaag-gllGRKLVAHEYQEesytdklllekvvSHALKLAARIGKqkQVLA 124  Magnetospirillum ...
ETR68550   45 NIVIGVVGss---dTQNLFVEGVKLAIQEINkng-giyNQLITPLFYDEkg---------slKKSLHISNKLSRnkNVVA 111  Candidatus Magnet...
KDB53396   43 DIVIAAVRd----pQQTDYVKGIELAVAQLNarpekllGRRVRLRIEQGsa---------dpVAENALVHRLADddEVVA 109  Sphaerotilus nata...
KPA11757   48 EIVIGIVDss---nIHNQFVEGVKLGIEEINefg--vlGKKIRPVYYDDqa---------scAKGQAIARKLARnpKVFA 113  Candidatus Magnet...
KPA14192   37 HIAIVDSSn-----TPSRFVDGVKMAIEELNenl--vaGKPVKALYYDDkg---------slDIAQKIAWEIADnpKIVA 100  Candidatus Magnet...
KRT77633   36 RIGVIVPQtsgmpgAARAVVEGAELAVAEINadr-gihGRRLALVMADDhg---------ipEDAARLVGELAAq-GVVG 104  Armatimonadetes b...
OQX11464   43 DIVIGIVDss---kMPSLFAEGVKLAIEEINkqg-gisGRRIRPLFYDDen---------svAKGQKIAVKLSEntDVIA 109  Desulfobacteracea...
OQX24220   53 DVVIAVVDts---aDRSLFLEGVNLAIEEINqeg-gllGRKIKALFYDDrr---------nlSAAQKVADKIAGndDIVA 119  Desulfobacteracea...
Feature 1         ###                    ###                                                  
4MLC_A     78 VIGHRNSfISIPAASIYDQAGLVXLSPASTspdltdhgyiHVFRNIPSDQEIARQLAIYLAeqg-heRXVIYYTDDsYGN 156  Desulfitobacteriu...
4Q6B_A     78 VIGHRNSfISIPAASIYDQAGLVXLSPASTspdltdhgyiHVFRNIPSDQEIARQLAIYLAeqg-heRXVIYYTDDsYGN 156  Desulfitobacteriu...
CAM75124  125 VIGHGSSaTAVPASAVYERFGKLFLATHATasslsnhrldLTFALQPNNADNAAFLARYAGqng-irRVVVLSDNSgYGI 203  Magnetospirillum ...
ETR68550  112 VIGHNFSrTAIPASINYENTGIVLISSGAThasfthygdkYTFRNVPSDACSATVIADYLKrnh-ldRIVILFDSLsYKK 190  Candidatus Magnet...
KDB53396  110 VLGHRSSaVAVPASLVYEAARVVFLPPFATrksltghgfqYVFRMAPSGPVMADQLASLTAllg-ygQVAVLNTRDdYSR 188  Sphaerotilus nata...
KPA11757  114 VVGHNSSdVAIATSITYEKSGILFISAGATaqdliqnhykYIFRNIPSDEQLTLPLIRYAHdnq-lkKIIVIFDNDnRMC 192  Candidatus Magnet...
KPA14192  101 VIGHFSSkIALSTSITYEKNGIIFITPKASisdlirdrnkYTFRNIPSDNVMAQEMAKFAHrre-fkKMSIIYEREsFGK 179  Candidatus Magnet...
KRT77633  105 IVGPLTDaTAIAAAPAAERRRVVLITPGATaplp--ygghYVFRTALPARTQAQALAAYLVeqlrvrRVAVVHDSNdYGT 182  Armatimonadetes b...
OQX11464  110 VIGHLYAeVAISAAVTYEENGVVFISPSTTdqdliresstYTFRNIPVDEDIAEEMGAFVErsg-ytKLAILFDSEsPGK 188  Desulfobacteracea...
OQX24220  120 VVGHRDSgIAIPISITYEKEGILFISPGATdpsftayggaYTFRNMPSDQITGDYAAKLAVrrg-fkKMAIFYQREsSGE 198  Desulfobacteracea...
Feature 1                                                                                     
4MLC_A    157 GLANAFEDYAraqgiTIVDRFNYygnlKDLERLYDKWQAFgx------dGIFIAKTatggGTEFLVDAKSVgieVPLIAG 230  Desulfitobacteriu...
4Q6B_A    157 GLANAFEDYAraqgiTIVDRFNYygnlKDLERLYDKWQAFgx------dGIFIAKTatggGTEFLVDAKSVgieVPLIAG 230  Desulfitobacteriu...
CAM75124  204 ETTDQFRSQLtqdggTVLYRGRLtsmnRSIDDLLLYLMDNplfrpadidAVFVTSSdaaqTAQFIIRARQLglrMPIIGP 283  Magnetospirillum ...
ETR68550  191 GLADLFRESAiehnlNIVAQKSYfswqSSFREMLSEINKNat-----fdAIFVAGLfp-sVGEIIKQARLVginQPVISD 264  Candidatus Magnet...
KDB53396  189 EMAFLFEDAAvgrglRVAHRVSFqasdEDYRSLVAELRAKsf------dAVFLSAAte-pGARMVQQLRELgvqVPIIGI 261  Sphaerotilus nata...
KPA11757  193 QLANFFMSEFsktngDVVASRSYisweTDFKNIIQEIKAIdh------dALFISGNlp-sAATFIKQTRNMginKTILTT 265  Candidatus Magnet...
KPA14192  180 RLAEIFQKYGdqqgiKFVSVKSYtsweKDFRPLISDLLNDdp-----fdALLICGNlp-tSAFIVKQLRDMginVPIIGS 253  Candidatus Magnet...
KRT77633  183 MVALAFEGAArakgaTITGRRLFr---DGEQDFARHVQGAind---raqAVFLAAYpd-eGVLFLRQARAVtsgLLIAGS 255  Armatimonadetes b...
OQX11464  189 RLAGIFHKYAvehgiKVVTEKSYssgeEDYRLLIADLLKKdf------dALFLGGVlp-sAANMIRQIRGMglnVPIISS 261  Desulfobacteracea...
OQX24220  199 RLAEIFHEKAtdlkiSIVAARSYfgwqTDFRVMLSELTKTcq-----fdAILIIGLlp-gAAELIKQARALgikVPIMGG 272  Desulfobacteracea...
Feature 1     ##                                                     #                        
4MLC_A    231 NSWDalsltedieniGXTAEGLLVGSFFnpqr-pdsrTQDFVEAFRREYgqpptsYAAAGYDAVILLAEALeksdlt--- 306  Desulfitobacteriu...
4Q6B_A    231 NSWDalsltedieniGXTAEGLLVGSFFnpqr-pdsrTQDFVEAFRREYgqpptsYAAAGYDAVILLAEALeksdlt--- 306  Desulfitobacteriu...
CAM75124  284 EHLYtrqm---eetvGKAAMRDVVAVSIydgdqqtmeGERLSQAFTKATgqqpglMAAMGFDAVKVLAYAVgrtgkldpa 360  Magnetospirillum ...
ETR68550  265 YTLDspel---mniaGKEAENTIVATVFdpqs-pnkeTSDFKERFNLEYgvepdiWAALGYDSIQLLDHVIrksrsv--- 337  Candidatus Magnet...
KDB53396  262 DSLNsrdf---aqsaGRAGNETIVPALYrssq-pgwrNAAFVERYRAAYqqdpdhNAAQGYDAMMLLARAIetakst--- 334  Sphaerotilus nata...
KPA11757  266 NKLDslml---fqiaDQQATDVVVTTFFdpiq-pveeTRAFVNHFTKKTrnspdaLSASGYDAIMLLAAAIeksgsf--- 338  Candidatus Magnet...
KPA14192  254 DSMDsmql---lniaGKSADGVSVPTVFdpki-annfTRYFVENFKYYYgfepdtLAAQGYDAIKVLGHAIekggtp--- 326  Candidatus Magnet...
KRT77633  256 DALYtedt---atwaGAAANDLYVPAGFvpet-plpiVRAFVASYRDRHgrtpnqFAAQAYDAVRVLVFALrragpd--- 328  Armatimonadetes b...
OQX11464  262 ELLDspel---wkiaGKAAEGTIISTVFdykl-prtiTSNFVKTFNARSgsdpdtWAAQGYDAIRLLAYAIekgesg--- 334  Desulfobacteracea...
OQX24220  273 YALDsqel---fsvaGQAADGVIVPAVFnpkl-pikeIRDFVRRFNSKFgvvpdsWAAQGYDAVQLLAYAVresgss--- 345  Desulfobacteracea...
Feature 1                                           
4MLC_A    307 hpatlaQGLRDLGPWEGVxGXHRFDGrGDDIGDLVVLK 344  Desulfitobacterium hafniense DCB-2
4Q6B_A    307 hpatlaQGLRDLGPWEGVxGXHRFDGrGDDIGDLVVLK 344  Desulfitobacterium hafniense DCB-2
CAM75124  361 aiadtlRIIRYDGPFIGAsGPVVFDSnGLTTDAAAYVV 398  Magnetospirillum gryphiswaldense MSR-1
ETR68550  338 spitisSTLRFLEHWQGVsGSYSFASdGGISGKSFFFK 375  Candidatus Magnetoglobus multicellularis str. Araruama
KDB53396  335 rtsavaSALRFMPYWIGVtGLHAFDAhGELRAKHYEFQ 372  Sphaerotilus natans subsp. natans DSM 6575
KPA11757  339 vpleiaSTLRLFKNWKGAiGHYSMDKnGGTKDKAIFFK 376  Candidatus Magnetomorum sp. HK-1
KPA14192  327 npivlsTNLRFLKNWQGVtGSYSFTQqGNIIDKSIYFK 364  Candidatus Magnetomorum sp. HK-1
KRT77633  329 -rekvrDVVGTLRRFPAVtGELSFDRwGDPVRDVIITR 365  Armatimonadetes bacterium CSP1-3
OQX11464  335 vpliigTTLRSLENWQGVtGKYSFERdGNISGKAVFFK 372  Desulfobacteraceae bacterium IS3
OQX24220  346 vpiimsSTLRILENWQGVtGTCSFTFdGDVTGKKIFFK 383  Desulfobacteraceae bacterium IS3

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