1DP4,1YK1,1YK0


Conserved Protein Domain Family
PBP1_NPR_GC-like

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cd06352: PBP1_NPR_GC-like 
Click on image for an interactive view with Cn3D
ligand-binding domain of membrane guanylyl-cyclase receptors
Ligand-binding domain of membrane guanylyl-cyclase receptors. Membrane guanylyl cyclases (GC) have a single membrane-spanning region and are activated by endogenous and exogenous peptides. This family can be divided into three major subfamilies: the natriuretic peptide receptors (NPRs), sensory organ-specific membrane GCs, and the enterotoxin/guanylin receptors. The binding of peptide ligands to the receptor results in the activation of the cytosolic catalytic domain. Three types of NPRs have been cloned from mammalian tissues: NPR-A/GC-A, NPR-B/ GC-B, and NPR-C. In addition, two of the GCs, GC-D and GC-G, appear to be pseudogenes in humans. Atrial natriuretic peptide (ANP) and brain natriuretic peptide (BNP) are produced in the heart, and both bind to the NPR-A. NPR-C, also termed the clearance receptor, binds each of the natriuretic peptides and can alter circulating levels of these peptides. The ligand binding domain of the NPRs exhibits strong structural similarity to the type 1 periplasmic binding fold protein family.
Statistics
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PSSM-Id: 380575
Aligned: 66 rows
Threshold Bit Score: 137.872
Created: 16-Jan-2007
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:1YKI; Human NPR-C complexed with brain natriuretic peptide, contacts at 3.5A
    View structure with Cn3D
  • Structure:1YK0; Human NPR-C complexed with atrial natriuretic peptide, contacts at 3.5A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1DP4_A       4 TVAVVLpltnt---sypwSWARVGPAVELALARVkarpdl----lpgwtVRMVLGSSenaagvcsdtAAPLAAVDLKWe- 75   Norway rat
1YK1_A      53 EVLVLLpqdd----sylfSLTRVRPAIEYALRSVegngtgrrllppgtrFQVAYEDSdc------gnRALFSLVDRVAaa 122  human
P16065      40 HVGLLAewttad-gdqgtLGFPALGALPLAISLAnqdsni----lngfdVQFEWVDThc------diNIGMHAVSDWWk- 107  purple urchin
P51841      54 KIGVVGpwac----dslfSKALPEVAARLAIERInrdpsf----dlsysFEYVILNEdcq-----tsRALSSFISHHQ-- 118  human
P55205      47 TVGFHApwni----shpfSVQRLGAGLQIAVDKLnsepvg----pgnlsWEFTYTNAtcn-----akESLAAFIDQVQr- 112  Norway rat
OWF50691    27 RIAWMAptke----yhgfSAATSVGGLKIALYAMenenap----ltnhtVKVQHFDSdcn-----skSALAAAVDAKEs- 92   Yesso scallop
BAE78828    73 HIGAIG------------ALRNDVKILEVSHKALqaegil----dddldVEIISQTGcge-----syEGVAVAADMYHl- 130  nematode
EKC20958    25 QAVWMAprvtppgsalavNASTSVGALAYAVDSIyrngi-----langiFQINWIDSgcd-----skQSIGEFTDFLFn- 93   Pacific oyster
BAE78830    24 HIGAVG------------SMRNAEKILQLSKEQLtqegvl----gndfdIEILNQMGcge-----syEGVAVGADMYHv- 81   nematode
BAE78829    57 HIGAVG------------VMPNDARILNISKENLieeglv----gddieFEIVSRQAcse-----sfEGVAVAAELYHv- 114  nematode
Feature 1                       #   #                                                          
1DP4_A      76 --hSPAVFLGPGCvysaAPVGRFtahWRVPLLTAGApalgigvk-deyalttRTGPSHv-KLGDFVTALHRrlgwehQAL 151  Norway rat
1YK1_A     123 rgaKPDLILGPVCeyaaAPVARLashWDLPMLSAGAlaagfqhkdseyshltRVAPAYa-KMGEMMLALFRhhh-wsRAA 200  human
P16065     108 --rGFVGVIGPGCg--cTYEGRLasaLNIPMIDYVCdenpvsdk-siyptflRTIPPSi-QVVEAIILTLQrye-ldQVS 180  purple urchin
P51841     119 ---MASGFIGPTNpgycEAASLLgnsWDKGIFSWACvnyeld----nkisypTFSRTLp-SPIRVLVTVMKyfq-waHAG 189  human
P55205     113 --eHISVLIGPACpeaaEVIGLLaseWDIPLFDFVGqmtaledh-fwcdtcvTLVPPKq-EIGTVLRESLQylgweyIGV 188  Norway rat
OWF50691    93 --fEPDLFLGPPCsaamKGVAQLashWNIPVFGWVSndvefqnr-ttystliRLLGPLn-RLPITMKYVSTvfk-wkRFA 167  Yesso scallop
BAE78828   131 --qKVKAFIGPYCnaemDAVARMaafWNIPIIGYMAasnnladk-nayptlaRISLRTtnSIAEATCAMLRhyg-wnKVA 206  nematode
EKC20958    94 --nRVDVIFGPPCtkamIPIAELaayRDIPVFGWLSneeslddk-nklqtlvRSIAPLs-AIGSILSIFLSgff-wlRLI 168  Pacific oyster
BAE78830    82 --qGVRAFIGPYCnaelDAVAKMatfWNIPVVGYMAssnsfadk-tifktlaRVSLRTtnSLAEAAAALIKhyg-wnKVA 157  nematode
BAE78829   115 --hQVRAFIGPYCaaelEAVTKMatfWNIPIISYSSvpnavsdr-svyktlaRVSSKNtnSIAEATVALLLhyk-wlKVA 190  nematode
Feature 1                   ##  #  ##            #                                             
1DP4_A     152 VLYADRlgddrpCFFIVEGLYMRvr-eRLNITVNHQEFvegd-------pdhyPKLLRAVRRKg--rVIYICssp----- 216  Norway rat
1YK1_A     201 LVYSDDkle-rnCYFTLEGVHEVf--qEEGLHTSIYSFdetk-------dldlEDIVRNIQASe--rVVIMCass----- 263  human
P16065     181 VVVENIt----kYRNIFNTMKDKf--dERDYEILHEEYyagfdpwdyemddpfSEIIQRTKETt--rIYVFFgda----- 247  purple urchin
P51841     190 VISSDEd----iWVHTANRVASAl--rSHGLPVGVVLTtgqd-------sqsmRKALQRIHQAdrirIIIMCmhsaligg 256  human
P55205     189 FGGSSAgs---sWGEVNELWKAVe--dELQLHFTITARvryssg----hsdllQEGLRSMSSVar-vIILICss------ 252  Norway rat
OWF50691   168 MIHDDRd----pYKAVAEAIKLS----DSNYFINSTHAvnpnm-----edaqvAKIFNQVRKYa--rIIIFAvpw----- 227  Yesso scallop
BAE78828   207 IITNTGi----lAYDRVLSFEEVfh-qRGINVVKKIMFdefads----kamiaSGLLNDIKNSa--rIVVCLfsnt---r 272  nematode
EKC20958   169 VISSADs----eCEAYASAFISEietpYWASYGFFLAHhyarvel-natdstiDTMYSAIKYEg--rIIIIIvpe----- 236  Pacific oyster
BAE78830   158 IATNTGa----vAFERVQSFEEVfh-qRGINVVRKIMLeeytna----kaimnSGLLQELENSa--rVVVCAfsst---r 223  nematode
BAE78829   191 IATNTGs----tAFERVSIFEEImh-rEGVTIVKKVMFdentda----nemmnSGQLGDLAANa--rIIICLfsst---k 256  nematode
Feature 1                                                                                      
1DP4_A     217 daFRNLMLLALNAglt-gedYVFFHLdvfgqslksaqglvp--------------------qkpwergdgqdrsaRQAFQ 275  Norway rat
1YK1_A     264 dtIRSIMLVAHRHgmt-sgdYAFFNIelfnsssygdgs--------------------------wkrgdkhdfeaKQAYS 316  human
P16065     248 sdLRQFAMTALDEgildsgdYVILGAvvdlevrdsqdyhsldyildtseylnqinpdyarlfknreytrsdndraLEALK 327  purple urchin
P51841     257 etQMHLLECAHDLkmt-dgtYVFVPYdallyslpykht--------------------------pyrvlrnnpklREAYD 309  human
P55205     253 edAKHILQAAEDLgln-sgeFVFLLLqqledsfwke-----------------------------vlaedkvtrfPKVYE 302  Norway rat
OWF50691   228 meMRKYMLVAHQLgmi-qgdFAFLCIhgdlftwdvnerdit-------------------sdrgwkrndthdedaREAFE 287  Yesso scallop
BAE78828   273 esSREFLTAANTQgmn-vneYGYVFPwlqdggkdaspwt------------------------gadgsmlqkvkdQYANA 327  nematode
EKC20958   237 seLRSYMVRAHAQgmd-gggYQFLFIkttlvtseeladles--------------------talwerglpddegaRQGFE 295  Pacific oyster
BAE78830   224 dmNKEFMQAVTLSgmn-nanYAWILPwlqletkdmapwl------------------------gengeyqqnvkdHFANS 278  nematode
BAE78829   257 elSKEFMQATYTMrmn-naeYAYIIPwlqsgtkdltpwi------------------------gadgemlqrvkdHYANA 311  nematode
Feature 1                                                                                      
1DP4_A     276 AAKIITYkep--dnpEYLEFLKQLKLLAdkkfnftv---edglkniIPASFHDGLLLYVQAVTETLAQGgt---vtDGEN 347  Norway rat
1YK1_A     317 SLQTVTLlrt--vkpEFEKFSMEVKSSVekqglnm-----edyvnmFVEGFHDAILLYVLALHEVLRAGys---kkDGGK 386  human
P16065     328 SVIIVTGapvl-ktrNWDRFSTFVIDNAldapfngel-elraeidfASVYMFDATMQLLEALDRTHAAGgdi--ydGEEV 403  purple urchin
P51841     310 AVLTITVe------sQEKTFYQAFTEAAargeipek--lefdqvspLFGTIYNSIYFIAQAMNNAMKENgq----aGAAS 377  human
P55205     303 SVFLIAPstyg-gsaGDDDFRKQVYQRLrrppfqssi-ssedqvspYSAYLHDALLLYAQTVEEMMKAEkd---frDGRQ 377  Norway rat
OWF50691   288 CVIHISMdtl--ppaRAKEFQQFASQYAhqqstnwinlpngttpdaYSPYLYDATLAWAIMVDKTLSQNev----pNGNN 361  Yesso scallop
BAE78828   328 IIIDDVNsfd---ntIVGPFIERIKDVGlteadv------dianiyGYLYLFDALKLYAIAARKVLNETgkaenllNGRM 398  nematode
EKC20958   296 NLLYLSFgdtlqgnaTSSWINDAYSAYLslklsfpsl-pdwaepdiYSPALHDAVYLYAHALRDNGGDPan----vNGSL 370  Pacific oyster
BAE78830   279 FIIDDVNgfd---ntLVTPFKERLEASGystddl------emkniyGYIHLYDALRLYALAVRATMNETgnensylNGKE 349  nematode
BAE78829   312 IIVDDVNgfd---dsVVSSFVEKIEKHGmqksdi------dvtninGYLHLFDSLKLYALAIRKVLNETdneayvtNGQF 382  nematode
Feature 1                                                                                      
1DP4_A     348 ITQr--mWNRSFQGv--------------tGYLki-drNGDRDtDFSLWDMdpe-tgaFRVVLNYNgt------------ 397  Norway rat
1YK1_A     387 IIQq--tWNRTFEGi--------------aGQVsi-daNGDRYgDFSVIAMtdveagtQEVIGDYFgk------------ 437  human
P16065     404 VSTl--lNSTYRSKt--------------dTFYqf-deNGDGVkPYVLLHLipipkgdGGATKDSLgm------------ 454  purple urchin
P51841     378 LVQh--sRNMQFHGf---------------NQLmrtdsNGNGIsEYVILDTnlk-eweLHSTYTVDme------------ 427  human
P55205     378 LIStlraDQVTLQGi--------------tGPVll-daQGKRHmDYSVYALqks-gngSRFLPFLHyd------------ 429  Norway rat
OWF50691   362 LFKe--sVDFFADGv--------------tGYIvl-dsIGDRYlNFRMMDMqedgifkTVIDLQYNmt------------ 412  Yesso scallop
BAE78828   399 MWQn--mRKLKFVGmvgas-------giasGQVsm-ddRAERApLYRGFFVspn-sdsVLPMVHMEptmldncdgianks 467  nematode
EKC20958   371 IKQa--vENTHFKGl--------------sGDVim-snDADRYaSITVFDLtes-gnfTTVAFYRMai------------ 420  Pacific oyster
BAE78830   350 VWNh--mRRITFPGlvsna-------gvtsGTVmm-ddIAERApVYAAFYVppn-sdtVRKVCELEpvmltncdgtktgn 418  nematode
BAE78829   383 IWNr--mRRMKFEGvvsrssseenkdagaiGTVlm-ddVADRApIFSAFYIspn-rdkVMKMVNMEselisncdglknks 458  nematode
Feature 1              
1DP4_A     398 -sqELMAV 404  Norway rat
1YK1_A     438 -egRFEMR 444  human
P16065     455 --yPIGTF 460  purple urchin
P51841     428 -meLLRFG 434  human
P55205     430 -sfQKVIR 436  Norway rat
OWF50691   413 -sfVARTA 419  Yesso scallop
BAE78828   468 gcyEIVVT 475  nematode
EKC20958   421 -vnGTIFP 427  Pacific oyster
BAE78830   419 gcyELQVT 426  nematode
BAE78829   459 gcfQLKIN 466  nematode

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