Conserved Protein Domain Family
PBP1_sensory_GC_DEF-like

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cd06371: PBP1_sensory_GC_DEF-like 
ligand-binding domain of membrane guanylyl cyclases (GC-D, GC-E, and GC-F) that are specifically expressed in sensory tissues
This group includes the ligand-binding domain of membrane guanylyl cyclases (GC-D, GC-E, and GC-F) that are specifically expressed in sensory tissues. They share a similar topology with an N-terminal extracellular ligand-binding domain, a single transmembrane domain, and a C-terminal cytosolic region that contains kinase-like and catalytic domains. GC-D is specifically expressed in a subpopulation of olfactory sensory neurons. GC-E and GC-F are colocalized within the same photoreceptor cells of the retina and have important roles in phototransduction. Unlike the other family members, GC-E and GC-F have no known extracellular ligands. Instead, they are activated under low calcium conditions by guanylyl cyclase activating proteins called GCAPs. GC-D expressing neurons have been implicated in pheromone detection and GC-D is phylogenetically more similar to the Ca2+-regulated GC-E and GC-F than to receptor GC-A, -B and -C which are activated by peptide ligands. Moreover, these olfactory GCs and retinal GCs share characteristic sequence similarity in a regulatory domain that is involved in the binding of GCAPs, suggesting GC-D activity may be regulated by an unknown extracellular ligand and intracellular Ca2+. Rodent GC-D-expressing neurons have been implicated in pheromone detection and were recently shown to respond to atmospheric CO2 which is an olfactory stimulus for many invertebrates and regulates some insect innate behavior, such as the location of food and hosts.
Statistics
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PSSM-Id: 380594
Aligned: 21 rows
Threshold Bit Score: 552.691
Created: 12-Jul-2007
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to NPR-C complexed with hormone peptide

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        #
P51841         54 KIGVVGPWaCDSLFSKALPEVAARLAIERINRDPSFDLSysFEYVILNEDCQtsRALSSFISHHQMASGFIGPTNPGYCE 133  human
NP_001098551   97 KVALVGPWtCDLLYSKALPDLAARLAISRINKNPYLNRGywYDYALVNEDCKstRALVRFSDLEGYGAAFLGPANPGYCS 176  Japanese medaka
OCT59476       42 RIGLVGPWtCDPLLAKALPKVAAQLAISDLNKDPSLSSGlwFDYLLLTQRCStpLALAAFSHMENSATAFVGPANPGYCS 121  African clawe...
NP_571939      59 KVGIIGPWnCDPNYAKSLPAIASRLAVGRINNDFSLDLGctMDFVILQEACEtsKALTSFVQYENVADAFVGPTNPGYCN 138  zebrafish
P51842         54 KIGVIGPWtCDPFFSKALPEVAAALAIERISRDMSFDRSysFEYVILNEDCQtsKALTSFISHQQMASGFVGPANPGYCE 133  Norway rat
OCT96414       59 TVGVVGPWqCDPLFSKAFPELAARLAVQKINSDSSLGLGftFDYRILQENCEtsKALVEFSSYDKHSSAFIGPVNPGYCD 138  African clawe...
NP_001103165   59 KVGVVGPWsCDPIFTKAQPGVAARLAVAHINKDPYLSQGitFDYIILDEDCEtsKSFARFLGYYTRASGFIGPVNPGYCE 138  zebrafish
XP_021333059   59 KVGVVGPWsCDPIFTKAQPGVAARLAVAHINKDPYLSQGitFDYIILDEDCEtsKSFARFLGYYTRASGFIGPVNPGYCE 138  Danio rerio
NP_776974      54 KIGVVGPWtCDPLFSKALPEIAAQLATERINKDPALDLGhsLEYVIFNEDCQasRALSSFISHHQMASGFIGPANPGYCE 133  Bos taurus
NP_001007577   54 KIGVIGPWtCDPFFSKALPEVAAALAIERISRDKTFDRSysFEYVILNEDCQtsKALASFISHQQMASGFVGPANPGFCE 133  Mus musculus
Feature 1            #                                                             ##  #  ##      
P51841        134 AASLLGNSWDKGIFSWACvnyeldnkisypTFSRTLPSPIRVLVTVMKYFQWAHAGVISSDEDIWVHTANRVASALRSHG 213  human
NP_001098551  177 SAALYTKEWDVGILSWGClkpymktvdmfpTFLRPLPLSSNVLFTVLRYFRWAHVAIISEDTDLWEATGHELASSLRALG 256  Japanese medaka
OCT59476      122 SASLLAKGWNKPMVSWLCt-----------GVLSPLPYPVDVLYAVFKFFHWAGVAIVTGPQDLWIGTGMELATALRRWG 190  African clawe...
NP_571939     139 AAALMSKNWDKSLFSWACvnheldrvqgypTFARTLPSPLRVLFNVLKFFRWANIGIVSSNEDIWIDTAAKLASALRNRG 218  zebrafish
P51842        134 AASLLGNSWDKGIFSWACvnheldnkhsypTFSRTLPSPIRVLVTVMKYFQWAHAGVISSDEDIWVHTANQVSSALRSHG 213  Norway rat
OCT96414      139 AATLLAKNWNKALFSWACinhdlddknsfpTFARTMPMPTKVLFQFMKYFRWAHVGVVSSNDDLWVDTARKVASALRNHG 218  African clawe...
NP_001103165  139 AASLLGKSWNKAVFSWSCiehelddvrshpTFARTMPVPSLVLLSFMRHFRWAHVGIISSSEDVWVEAAIKLANALRSHG 218  zebrafish
XP_021333059  139 AASLLGKSWNKAVFSWSCiehelddvrshpTFARTMPVPSLVLLSFMRHFRWAHVGIISSSEDVWVEAAIKLANALRSHG 218  Danio rerio
NP_776974     134 AASLLGNSWDKGIFSWACvnyeldsknshpTFSRTLPSPIRVLLTVMKYFQWAHAGVISSDEDIWVHTAYRVASALRSRG 213  Bos taurus
NP_001007577  134 AASLLGTSWDKGIFSWACvnheldnkhsfpTFSRTLPSPIRVLVTVMKYFQWAHAGVISSDEDIWMHTANRVSSALRSQG 213  Mus musculus
Feature 1             #                                                                           
P51841        214 LPVGVVLTTgqdsqsmRKALQRIHQADRIrIIIMCMHSaLIGGETQMHLLECAHDLkmtdgtYVFVPYDALLYSLPykht 293  human
NP_001098551  257 LPVNPVVTMetekdgpRSALAKVREADRVrVIIMCMPSvLIGGQAQYQLLTTALAMrmidrgYVFIPYDTLLYSLPykda 336  Japanese medaka
OCT59476      191 IPVGPVIIMeegaegpKEALKRIKRRQRVkVVVMCMHSvLIGGEDQRRLLEEAHDMrltdgsVVFIPYDTLQFSLPynhl 270  African clawe...
NP_571939     219 LPVGIVTSMgnndtmlENTLMSIKNAGDIkVIIMCMHSvLIGGEQQATFLTKAYDMglasgrYVFIPYDTLLYSLPyini 298  zebrafish
P51842        214 LPVGVVLTSgqdsrsiQKALQQIRQADRIrIIIMCMHSaLIGGETQTHFLELAHDLkmtdgtYVFVPYDVLLYSLPykhs 293  Norway rat
OCT96414      219 LPIGIVTSMgngeeglRATLAKIEEANDLrVIIMCMHSvLIGGEDQGTFLSRAHDMgltdgrYVFVPYDTLLYSLPykns 298  African clawe...
NP_001103165  219 LPVGIVTSArndhtsvRQTLAKVRKVADLrLVILVMHSvLIGGRTQKLLLETAHDMrmtdgsLVFMSYDTLFYSLPyhhv 298  zebrafish
XP_021333059  219 LPVGIVTSArndhtsvRQTLAKVRKVADLrLVILVMHSvLIGGRTQKLLLETAHDMrmtdgsLVFMSYDTLFYSLPyhhv 298  Danio rerio
NP_776974     214 LPVGVVLTTgqdsqsiQKALQQIRQADRIrIIIMCMHStLIGGETQTHLLEWAHDLqmtdgtYVFVPYDTLLYSLPykht 293  Bos taurus
NP_001007577  214 LPVGVVLTSgrdsqsiQKALQQIRQADRIrIIIMCMHSaLIGGETQTHFLELAHDLkmtdgtYVFVPYDVLLYSLPykhs 293  Mus musculus
Feature 1                                                                                         
P51841        294 pyrvlRNNPKLREAYDAVLTITVe-sQEKTFYQAFTEAAARGEipeklefdQVSPLFGTIYNSIYFIAQAMNNAMKENgq 372  human
NP_001098551  337 fyymlGNDTKLRRAFDGVLTITMe-sGERNFYEAFKDAQDRFElrsstpaeQVSPFFGTIYNMMYYIAMAVEQTRASGvh 415  Japanese medaka
OCT59476      271 -fpvfTNNTKLRRAYDAVLTITAs-sEHGNFYETFEYAKARHKvpqdidpkEVSPLFATIYNSIYLLGAAVDSSYRATqr 348  African clawe...
NP_571939     299 tyyplQNNSKLSKAYDAVLTITLd-sDIMTFNEAFNAAKQLGElmvtqepeQVSPLFGTIYNSLYLLAKSMHNARRAGrw 377  zebrafish
P51842        294 pyqvlRNNQKLREAYDAVLTITVe-sHEKTFYEAFTEAAAGGEipekldshQVSPLFGTIYNSIYFIAQAMSNALKENgq 372  Norway rat
OCT96414      299 syqvlEKNPKLKAAYDAVLTITMd-yEDLSFYDAFAKAKENGEiktslepqQVSPLFGTIYNAMYLLANAMSSAWRQGaw 377  African clawe...
NP_001103165  299 tqpalRYNSKLLRAYDAVLTITIespKEQSFYQAFEKAQEDGElpkhlkpqQVSPLFGTIYSSIVFMAHAVQSVRAAGqw 378  zebrafish
XP_021333059  299 tqpalRYNSKLLRAYDAVLTITIespKEQSFYQAFEKAQEDGElpkhlkpqQVSPLFGTIYSSIVFMAHAVQSVRAAGqw 378  Danio rerio
NP_776974     294 pykvlRNNPKLREAYDAVLTITVe-sQEKTFYQAFEEAAARGEipeklesdQVSPLFGTIYNSIYFIAQAMNNAMKENgw 372  Bos taurus
NP_001007577  294 pyqvlRNNPKLREAYDAVLTITVe-sHEKTFYEAYAEAAARGEipekpdsnQVSPLFGTIYNSIYFIAQAMNNAMKKNgr 372  Mus musculus
Feature 1                                                                               
P51841        373 -aGAASLVQhsRNMQFHGFNQLMrt-dsNGNGIsEYVILDTnlkeweLHSTYTVDme-----meLLRFGG 435  human
NP_001098551  416 wvTGRSLGNseGGFEFEGFNQPLqagrnGEGMQaGYVVLDYsgmgnsLYSTHFLHpthtdtmtgGLRYLG 485  Japanese medaka
OCT59476      349 -vTLSSTTRhaKNIQLEGFGYPVnl-dnDGDSQtNFVILDSdgeskrLFPVYTFQsa-----tgDLTFLR 411  African clawed frog
NP_571939     378 -lSGTNLAYftRNITFTGFNQDIqt-deQGNGQtNYVILDTeawgtqLYRCFLVDmt-----sdLVLFAG 440  zebrafish
P51842        373 -aSAASLTRhsRNMQFYGFNQLIrt-dsNGNGIsEYVILDTngkeweLRGTYTVDme-----teLLRFRG 435  Norway rat
OCT96414      378 -iSGTNLVDytKNLEYPGFTQTLyt-dgKGNDLsSFVVLDTdgkvnqLFPTYSVEms-----snLVRFLG 440  African clawed frog
NP_001103165  379 -mSGGNIAQnaRNLLFKGGSSLQan--sSDFGMlDYVILDTdgfsweLQPTYRIEmq-----tdMVRFLG 440  zebrafish
XP_021333059  379 -mSGGNIAQnaRNLLFKGGSSLQan--sSDFGMlDYVILDTdgfsweLQPTYRIEmq-----tdMVRFLG 440  Danio rerio
NP_776974     373 -aSAASLVQhsRNVQFYGFNQLIrt-daNGNGIsEYVILDTnwkeweLHSTYTVDme-----teLLRFGE 435  Bos taurus
NP_001007577  373 -aSAASLVQhsRNMQFYGFNQLIkt-dsNGNGIsEYVILDTngkeweLRGTYTVDme-----teLLRFRG 435  Mus musculus

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