Conserved Protein Domain Family
PhsB_like

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cd10553: PhsB_like 
uncharacterized beta subfamily of DMSO Reductase similar to Desulfonauticus sp PhsB
This family includes beta FeS subunits of anaerobic DMSO reductase (DMSOR) superfamily that have yet to be characterized. DMSOR consists of a large, periplasmic molybdenum-containing alpha subunit as well as a small beta FeS subunit, and may also have a small gamma subunit. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and the tungsten-containing formate dehydrogenase (FDH-T). Examples of heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.
Statistics
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PSSM-Id: 319875
Aligned: 13 rows
Threshold Bit Score: 223.78
Created: 29-Jan-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KUJ95187       2 SIYYLFHDRSRCIGClSCQIHCKQNKNLTnpAPKPCQIFTfg-pkLIQGKVKVaNIFVSCFQCDNPWCVKACPTGALYKR 80  Desulfonauticus...
WP_006423611   2 SKYYLFQDVKNCINCrSCEVTCKSNKNLPp-GPRLCEVIAvg-psLIGGLPRAaYTFMPCFHCEDPWCVAACPTGAMQKR 79  delta proteobac...
WP_007521623   2 STYCIVTDERRCISCkACEIHCKVKNAMPv-GIKLGEHFTegplpSASGAPLFrTLYMPCFHCEEPECVDVCPTGAMTKR 80  Desulfovibrio s...
WP_018086588   2 SNYYLYHDSHKCISChACEVQCKVNKGLPl-GPRPNQVIAvg-pmLVSGQPRAnFVFISCFHCEQPWCVAACPNGAMRKR 79  Desulfurispora ...
WP_022658366   2 SKYIVMHNSADCIGCkACEVQCRSLHNGGp-GAFFCRVLSv---eQTEPKPALgFVYTSCFHCENPWCVKACPTGAMRRR 77  Desulfovibrio d...
WP_007293334   2 NNYMLYLNSKRCIGChGCEIHCKSNKRLPe-GPSLCEISHep-lkMVGRIPKTeFQFRSCYHCDDPHCVPVCPTGAMLKR 79  delta proteobac...
WP_022660330   2 AAYRIKLDKSRCIACmACLVHCKQKNRVPq-GLSLNKLFAel--eDKDGKPVLkVKYQPCLMCKNPECVPACPTGAMQKR 78  Desulfovibrio l...
WP_022853767   2 AKYYIYHDPTRCIGClACELSCMDWKGLPf-GEANCRIFRsg-pdMFHGKPRLmFLYNSCFHCERPFCVEACPTGALFKR 79  Thermodesulfata...
WP_005990772   2 SKYMIQLDKKRCIAChACEVHCQVKNGVPa-SAKPGKLVSvg-pdMAKGKPRLlNLYMSCYHCEKPWCVPACPTGAMTRR 79  Desulfovibrio f...
BAU23305       2 SEYVITQNQRKCIGClACVVHCKVENNLPi-GPRFCDILPvg-pkDVNGIPRIyFVYMNCFHCEDAFCVRACPTGAMTRR 79  Thermodesulfoba...
AFM24447      16 DRVHLFHDSERCIGCySCELHCKMKNNLPv-GPRLCRIIEig-prTRQHTLKMdFHFLPCFHCENPFCANVCPTGAIQKR 93  Desulfomonile t...
ABB37876       2 SRYRLKLNKKRCIHCkACEVHCKAKNNTPa-GIKLGVHTSse-pvMVDGVPRMkAAYQCCYHCETPECVDVCPTGAMIRR 79  Desulfovibrio a...
YP_002248951   2 SIYYIYQDHDRCIGCyACEVHCKTKNELPv-GPRLCRIIEtd-ikLIGGLPRQrFVFMPCFHCEDPWCVKACPTGAMQKR 79  Thermodesulfovi...
KUJ95187      81 EkDGIVAMDRSLCIGCKSCIVACPFGAPQWDPsSHTVVKCDFCVNRLEQGLKPACVENCTTGCLYFGT 148 Desulfonauticus sp. 38_4375
WP_006423611  80 QkDGIVFVDHSVCVGCKTCMSACPWGAPQWSEeMGKVVKCDYCKDRIDQGLDPACVTVCTTHCLHFGR 147 delta proteobacterium NaphS2
WP_007521623  81 EaDGIVYVEADDCIGCGACLEACPWHIPQWNEdGDKAVKCDLCMDRIDTGLKPACVTGCTTHALILTG 148 Desulfovibrio sp. A2
WP_018086588  80 EqDGIVYVDQNLCKGCKSCIMACPWSSPQWDArLGKVVKCDLCKDRLDKGEKPACVQACPVDCLQLVA 147 Desulfurispora thermophila
WP_022658366  78 D-DGIVYVETSACVGCKACITACPWAAPQWNAqTGKVDKCDLCRDRIDQGLKPACVTTCAMSCLQFST 144 Desulfovibrio desulfuricans
WP_007293334  80 A-DGIVYVDQEKCTGCVACVGACPWNIPQLNPaTGKVVKCDFCLDRVDVGLKPACVTRCTAHALRFVA 146 delta proteobacterium MLMS-1
WP_022660330  79 EsDGLVFIDEELCIGCGECIEACPWDVPVLDEaRGKAIKCDYCMDRIKEGRDPACVTGCTAHALSFLR 146 Desulfovibrio longus
WP_022853767  80 EsDGIVMFKSDLCIGCRACIMACPWGIPQWNSlEGKIHKCDYCVERIDEGLEPACVTRCPMDALKFVR 147 Thermodesulfatator atlanticus
WP_005990772  80 EdDGVVYVREELCVGCKACIQACPWRIPQWNEaTGKVVKCDYCRDRIDAGLDPACVTGCTAHALRFVR 147 Desulfovibrio fructosivorans
BAU23305      80 EkDGIVYVRDELCIGCKSCMKACPWGIPQWNPeTGKVFKCHLCMHRLDRGEKPACVEGCTTSCLSFVL 147 Thermodesulfobacteriaceae b...
AFM24447      94 VkDGIVFVDSKLCIGCKCCIAACPWGVPQWNPeTGKIVKCDYCMDRIDKGLKPACATGCLTQCLHFGK 161 Desulfomonile tiedjei DSM 6799
ABB37876      80 EsDGIVYVDQETCIGCEACIDACPWHIPVFNAaTATVLKCDFCMDRVDEGKLPACVTACTTHALSFTR 147 Desulfovibrio alaskensis G20
YP_002248951  80 SkDGIVFVEQSLCVGCKSCITACPWGVPQWNPeTGKVVKCDYCKDRVDQGLKPACVTKCTTKALKFVS 147 Thermodesulfovibrio yellows...
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