2IVF


Conserved Protein Domain Family
EBDH_beta

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cd10555: EBDH_beta 
Click on image for an interactive view with Cn3D
beta subunit of ethylbenzene-dehydrogenase (EBDH)
This subfamily includes ethylbenzene dehydrogenase (EBDH, EC 1.17.99.2), a member of the DMSO reductase family. EBDH oxidizes the hydrocarbon ethylbenzene to (S)-1-phenylethanol. It is a heterotrimer, with the alpha subunit containing the catalytic center with a molybdenum held by two molybdopterin-guanine dinucleotides, the beta subunit containing four iron-sulfur clusters (the electron transfer subunit) and the gamma subunit containing a methionine and a lysine as axial heme ligands. During catalysis, electrons produced by substrate oxidation are transferred to a heme in the gamma subunit and then presumably to a separate cytochrome involved in nitrate respiration.
Statistics
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PSSM-Id: 319877
Aligned: 18 rows
Threshold Bit Score: 554.22
Created: 30-Jan-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Fe-S clustertrimer
Conserved site includes 49 residues -Click on image for an interactive view with Cn3D
Feature 1:Fe-S cluster binding site [ion binding site]
Evidence:
  • Structure:2IVF: Aromatoleum Aromaticum ethylbenzene dehydrogenase binds to 4[Fe-S] clusters; contacts at 4A distance.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #######   #   #           ## #                                     
2IVF_B     15 AKRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHM-RWNNVTTYPGKGYPRDYErKGGGFLRg-------EPQPGVLP 86  Aromatoleum aromat...
AFF61341    9 TQRQVSMVLDLNKCLGCHTCSIACKKMWNTDPGTDYT-YWNNVETMPGKGYPANYP-QIGGRTEt------gKVKRGQIP 80  Sterolibacterium d...
Q47CW7      8 PKRQLTYVTDLNKCIGCQTCTVACKKLWTTGPGQDFM-YWRNVETTPGLGYPRNWQ-TKGGGYKn------gELQKGKIP 79  Dechloromonas arom...
ESP89854   27 VDHQVAMVMDLNKCIGCQTCTVACKSLWTEGGGRDYM-YWNNVETKPGAGYPRDWE-ESGGGWQssd---hsERRPGEIP 101 Candidatus Halobon...
EPZ16269    2 SKRQVAMVMDLNKCIGCQTCTVACKTLWTRREGMEHM-LWNTVNTQPGAGTPHNFE-KMGGGFKd------gVAQPGIRP 73  Thauera terpenica ...
AKH20371    9 PNRQLTYVVDLNKCIGCQTCTVACKKLWTTSPGQEFM-YWRNVETTPGLGYPRNWE-KKGGGYKng-----vLQKDGHKP 81  gamma proteobacter...
KKM12073    2 SKRQLAMVIDINKCLGCHTCTIADKNMWLRGEGQEYM-CWNNVETRPGKGFPANWE-RLGGGWKd------gEIHLGKLP 73  Clostridiales bact...
KHG32901    5 PKRQLTFIVDLNKCIGCQTCTVACKKLWSTAPGQEFM-YWRNVETTPGLGYPKNWQ-SKGGGYKng-----mLQTDGHYP 77  Sulfurospirillum s...
KKO18080    3 IMKQIRMVADLNKCLGCQTCTMSCKTMWTDRNQGQTHmYWINVETRPGKGYPKNWE-TQGGWFTad-----rNNIPLPNI 76  Candidatus Brocadi...
ABW66006   29 SNRQIGMVMDLNKCIGCQLCSMACKTLWTSKEGREYM-WWNKVNTMPGKGSPKDWE-KMGGGYKvkfggkvmEPVQGKHP 106 Desulfococcus oleo...
Feature 1                                                                         # #####  ###
2IVF_B     87 tlidsgDDFQFNHKe----vFYEGKGQTVhfhptsk--stgkdpaWGYNWDEDQGGGKWPNp-FFFYLARMCNHCTNPAC 159 Aromatoleum aromat...
AFF61341   81 nm--dtGYGRSWSFnhkdvlASTGQPVKLwikpk-------eevkWGPNFDEDEGTGHYPQdnHYFYLPRLCNHCTHPAC 151 Sterolibacterium d...
Q47CW7     80 pm---iDYGIPFEFdya-grLFEGKKERVrpsp---------tprSAPNWDEDQGAGEYPNn-SFFYLPRMCNHCTKPAC 145 Dechloromonas arom...
ESP89854  102 dk---eEYGEAWEFnhe-evMYEGSDQPLrpes---------dpeWGPNWDEDQGAGEHPNs-YYFYLPRICNHCTHPSC 167 Candidatus Halobon...
EPZ16269   74 tv---eDFGKAWEFnhk-dvFFGGKSDISlaadg-------grhgKGPNWDEDQGGGEFPNs-HYFYMPRICNHCTHPAC 141 Thauera terpenica ...
AKH20371   82 tl---dEYGVPFEYdya-arLFEGKKGRVkpsp---------eprWAPNWDEEQGTGEYPNn-MFQYLPRMCNHCENPAC 147 gamma proteobacter...
KKM12073   74 al---eDYGIPWSWdw---eQLPHIAPQVap-------------tWGPNWEEDVGAGDYPNv-WYFYLARPCNHCTKPAC 133 Clostridiales bact...
KHG32901   78 tl---dEYGVPFKYdfa-arLFEGKKGSVkpsp---------eprWAPNWDEDQGVGEYPNn-IFAYLPRMCNHCTNPAC 143 Sulfurospirillum s...
KKO18080   77 n----eDYGAPWEYnh--heVLKTEGGDSqasnlipspvpsgsnaYASNWDEDVGKGTFPNs-YYFYLPRICNHCTDPPC 149 Candidatus Brocadi...
ABW66006  107 tr---kEFGDMWDYnw--ndVVNNKAGAVhlqaknq--tdgsvpdWSMNWDEDQGAGQYPNg-FYFYLPRICNHCAYPAC 178 Desulfococcus oleo...
Feature 1        # #  #        #      #######   # # ##        # #####               ###   ##  
2IVF_B    160 LAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCYPRIEKGIA------NACNRQCPGR 233 Aromatoleum aromat...
AFF61341  152 LDACPRGAIEKREHDGIVLVNQDRCHGYRFCVEACPYKKVYFDHVRQVSAKCIFCAPRVEEGVA------PACARQCPGR 225 Sterolibacterium d...
Q47CW7    146 LEACPNEAIYKREQDGIVVIHQDKCKGAQACVQSCPYAKPYFNPVANKANKCIGCFPRIEQGVA------PGCVAQCVGR 219 Dechloromonas arom...
ESP89854  168 VEACPRKAIYKREEDGIVLIDQERCRGYRYCVEGCPYKKVYYNAAQKTSEKCIFCYPRIEGEGPdgetfaPACAEDCPPQ 247 Candidatus Halobon...
EPZ16269  142 LEACPRKAITKREEDGIVLIDEDRCKGYRFCQEACPYKKIYYNEMEGVSQKCIFCFPRIDEGVT------TACSRQCPGR 215 Thauera terpenica ...
AKH20371  148 LESCPNDAIYKRAEDGLNIVNLDKCKGRQECIKACPYGKVYFNTTDQKANKCIGCFPRIEKGVA------PACVAQCVGR 221 gamma proteobacter...
KKM12073  134 VAACPRKAVYKRDEDGIVLIDQERCRGYRYCVRACPYKKPYFNAIRYKSEKCIFCFPRVEQGVP------PACVGQCPGR 207 Clostridiales bact...
KHG32901  144 VEACPTDSIYVRAEDGLKVINLEKCVGVKECVKACPYGKIYFNETDHQSNKCIGCFPRIEKGVA------TACVAQCVGR 217 Sulfurospirillum s...
KKO18080  150 LEACPRQAIYKRKEDGIVLIDPKRCRGYRYCIKGCPYKKIYYNPVEKISQKCIFCYPRIEQRKG------NFCAAQCVGR 223 Candidatus Brocadi...
ABW66006  179 VDACPRNAIYKRDEDGVVLIDQDRCKGYRFCLEACPYKVIYFNFLTDTSMKCIFCYPRLDEKVA------NACARQCTAR 252 Desulfococcus oleo...
Feature 1     ##                                                                              
2IVF_B    234 VRAFGYLDDTtSHVHKLVKKWKVALPLHAEYGTGPNIYYVPPMGARGFGEDGEitdk-triPLDVLEGLFGPe------- 305 Aromatoleum aromat...
AFF61341  226 LRFVGYRDDQdGPIWKLVEKYQVALPLHGEWGLGPNVFYVPPMSPSKMDDRGRptde-priPLAYLESLFGPr------- 297 Sterolibacterium d...
Q47CW7    220 AMHVGFIDDTnSSVHKLIRLYKVALPLHPEFGTEPNVFYVPPVLGPRMELPNGelstdpkiPLAQLEGLFGKq------- 292 Dechloromonas arom...
ESP89854  248 LRLVGFLDDEaGPVHKLVEEYEVALPLHPEYRTQPNVYYIPPFAPPQHSDDGEsidv-eriPRPYLEELFGEr------- 319 Candidatus Halobon...
EPZ16269  216 VRFVGYLDDPeGPIWKLVTKWKVALPLHAEYGTEPNVFYVPPLSPPKLDEDGNatde-priPTEYLVSLFGDg------- 287 Thauera terpenica ...
AKH20371  222 AMHVGFIDDTeSSVYKLAKLWKVAMPMHPEFGTKPNVLYIPPFVGPLKEDENGnmlatqkmPLEVLQGLFGPd------- 294 gamma proteobacter...
KKM12073  208 IRFFGYLDDReGPVYKLVKEFQVALPLHPELVTEPNVYYIPPLSPPRVDAQGRpgge-griPVEYLESLFGPq------- 279 Clostridiales bact...
KHG32901  218 AMHVGFIDDVnSSVYKLAKLWKVAMPLHPEFGTEPNVLYIPPFVGPAMQDEKGnmmetqkmPIGVLQGLFGSk------- 290 Sulfurospirillum s...
KKO18080  224 IYWVGYAEDAnSNVYKLVNKWKVALRLHPEYKTEPNVFYIPPLSPPTYSFAGKltts-priPIEMLAKMFGDtydqsydq 302 Candidatus Brocadi...
ABW66006  253 VRWIGYTEEPeSIIYKLTKVWKVALPLHAEYGTNPNVFYVPPLAPHRLAPDGKidpskpriPREYLRYLFGPe------- 325 Desulfococcus oleo...
Feature 1                                      
2IVF_B    306 ----VKRVLAVLHTERENMRAGRGSELMDLLIS 334 Aromatoleum aromaticum
AFF61341  298 ----VKDVLNLLHAERDKKKRGEKSELMDLLIA 326 Sterolibacterium denitrificans
Q47CW7    293 ----VRDVLAILQTEREKKMKGLASDLMDVLIG 321 Dechloromonas aromatica RCB
ESP89854  320 ----VHDALDRIARERDEVDRGGESELLDLLTD 348 Candidatus Halobonum tyrrellensis G22
EPZ16269  288 ----VHHALETVRREQDKSRRGEPSELMDLLIA 316 Thauera terpenica 58Eu
AKH20371  295 ----VVGVLDILRAEREKKMAGQGSALMDTMIG 323 gamma proteobacterium SIP-G1
KKM12073  280 ----VRQVLSRLEAELAAARLGKPSELVATLIS 308 Clostridiales bacterium PH28_bin88
KHG32901  291 ----VGGVLAVLKAERAKKIAGKKSELMDIMIG 319 Sulfurospirillum sp. MES
KKO18080  303 rvarIRQISDIIQSEREKVSSGGSSELIDILIS 335 Candidatus Brocadia fulgida
ABW66006  326 ----VDASLDIMQKELDKVRAGGRSELMEILKA 354 Desulfococcus oleovorans Hxd3

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