Conserved Protein Domain Family
7tmA_Parapinopsin

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cd15075: 7tmA_Parapinopsin 
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.
Statistics
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PSSM-Id: 320203
Aligned: 6 rows
Threshold Bit Score: 466.947
Created: 10-Nov-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   #   #
O42266        31 TILSIIMALSSTFGIILNMVVIIVTVRYKQlrqpLNYALVNLAVADLGCPVFGGLLTAVTNAMGYFSLGRvGCVLEGFAV 110 channel catfish
NP_998830     31 TILALIMAVFCAAALFLNVTVIVVTFKYRQlrhpINYSLVNLAIADLGVTVLGGALTVETNAVGYFNLGRvGCVIEGFAV 110 western clawed ...
NP_001005312  30 ITLSLLMAVFSITSVVLNATVIVVTLRHKQlrqpLNFALVNLAVADLGTTLTGSVPSVVTNAVGYYIMGRiGCVLEGFCV 109 zebrafish
CAG06878      27 IVLSILMALVTGPAIVLNATVIIVSLMHKQlrqpLNYALVNMAAADLGTAVSGGLLSVVNNAQGHFSLGRtGCVLEGFAV 106 spotted green p...
BAD13381      24 TILAVIMAVFTIASLVLNSTVVIVTLRHRQlrhpLNFSLVNLAVADLGVTVFGASLVVETNAVGYFNLGRvGCVIEGFAV 103 arctic lamprey
BAM28745      27 TIIAIIMATSCTLSVILNTTVIAVTIKYRQlrqpINYSLVNLAIADLGAALLGGSLNVETNAVGYYNLGRvGCVTEGFAM 106 common iguana
Feature 1        #  ##                                                               ####        
O42266       111 AFFGIAGLCSVAVIAVDRYMVVCRPlGAVMFqTKHALAGVVFSWVWSFIWNTPPlFGWGSYQLEGvmTSCAPNWyrrdpv 190 channel catfish
NP_998830    111 AFFGIAALCTIAVIALDRVFVVCKPmGTLTFtPKQALAGIAASWIWSLIWNTPPlFGWGSYELEGvmTSCAPNWysadpv 190 western clawed ...
NP_001005312 110 AFFGISALCTVALIAVERLFVVCRPlGSITFqCRHAAGGLLSCWLWSLIWNTPPlLGWGSYQLEGagTSCGPHWqsrelr 189 zebrafish
CAG06878     107 SLCGIASLCTVALIAVERMFVICKPlGQMQFqKQHALAGISLSWLWSLTWNLPPlFGWGRYELEGvgTSCAPDWqsreph 186 spotted green p...
BAD13381     104 AFFGIAALCTIAVIAVDRFVVVCKPlGTLMFtRRHALLGIAWAWLWSFVWNTPPlFGWGSYELEGvrTSCAPDWysrdpa 183 arctic lamprey
BAM28745     107 AFFGIVALCTIAVIAVDRAIVIAKPmGTLTFtTRKAMIGVAISWIWSLVWNTPPlFGWGGYQMEGvmTSCAPDWynsdpi 186 common iguana
Feature 1               ##   #                                                                   
O42266       191 NVSYILCYFMLCFALPFATIIFSYMHLLHTLWQVaklqva--------------dsgstaKVEVQVARMVVIMVMAFLLT 256 channel catfish
NP_998830    191 NMSYIVCYFSFCFAIPFLIIVGSYGYLMWTLRQVaklgva--------------eggttsKAEVQVSRMVIVMILAFLVC 256 western clawed ...
NP_001005312 190 DVSYIICYFSVCFAVPFAIILVSYSWLLYTLRQVllemvnnlgtfgmlfsayydlghifkHYKHCNAALTLVLFFVVEYH 269 zebrafish
CAG06878     187 NVSYVLAYFTVCFAAPFAIILVSYAKLMWTLHKVtkmtcl--------------eggavaKSEMKVAYMVVLMVATFLLS 252 spotted green p...
BAD13381     184 NVSYITSYFAFCFAIPFLVIVVAYGRLMWTLHQVaklgmg--------------esgstaKAEAQVSRMVVVMVVAFLVC 249 arctic lamprey
BAM28745     187 NVSYIVCYFLFCFTIPFVTILVSYGYLLWTLRQVakfgvt--------------qrgstnKAEAQVSRMVIVMVMAFLIC 252 common iguana
Feature 1        #   #                      #   #                     
O42266       257 WLPYAAFALTVIidsniyiNPVIGTIPAYLAKSSTVFNPIIYIFMNrQFRDYA 309 channel catfish
NP_998830    257 WLPYAAFAMTVVanpgmhiDPIIATVPMYLTKTSTVYNPIIYIFMNkQFQECV 309 western clawed frog
NP_001005312 270 WLPYAALALTVVskpevqlAVLVKVLPIYMAKSSTVYNPLIYIYMNkQVSRTS 322 zebrafish
CAG06878     253 WLPYAGLSMLVVfkpdveiNPLVGTVPVYLAKSSTAYNPIIYIYLNkQVNLPQ 305 spotted green pufferfish
BAD13381     250 WLPYALFAMIVVtkpdvyiDPVIATLPMYLTKTSTVYNPIIYIFMNrQFRDCA 302 arctic lamprey
BAM28745     253 WLPYATFALVVVgnpqiyiNPIIATVPMYMAKSSTFYNPIIYIFMNkQFRDCL 305 common iguana

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