Conserved Protein Domain Family
7tmA_OR8S1-like

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cd15229: 7tmA_OR8S1-like 
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320357
Aligned: 37 rows
Threshold Bit Score: 393.886
Created: 4-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NH09        25 ALLFVLFLGIYLLTIMENLMLLLMIRADSClhkpMYFFLSHLSFVDLCFSSVIVPKMLENLlsqrKTISVegCLAQVFFV 104 human
XP_003793690  25 ALLFVLFLVIYLLTIMGNLLLLLLIRTDSHlhtpMYFFLSHLSFVDLCFSSVTVPKMLQNLlsqrKTISVegCLTQVFFV 104 small-eared galago
EPQ14651     193 VVLFVLFLVIYLLILTENLLMLLVIRADSHlhtpMYFFLSHLSFLDAFYSSIVVPKLLENLlskwKTISLlgCFTQVSLV 272 Brandt's bat
XP_003772603  31 YALGFLFLLIYFLTLAGNLLIMAVIKMDSQlhtpMYFFLVNLSFFDMFYSSVMAPKLVYTLltknKTVSLsgCVVQIGLM 110 Tasmanian devil
XP_002939873  23 FPLFLVFLLIYLITLTGNLLILLLIFTDSHlhtpMYFFLGTLACLDMSYSSVTVPRMLFDLlrerKIISVpaCITQICFF 102 western clawed ...
XP_006274670  25 IFLFLVFLIIYIITLLGNVVIMLVIRTDPHlhtpMYFFLSNLSFLDICYSSVTVPKMLVNFlverKTISLsgCTTQLFFV 104 American alligator
XP_003224583  27 IFLFLIFLLIYIITLSGNVLIMLVIKADPQlhtpMYFFLTNLSLIDICFSSVTVPKMLENLlateKTISLssCIAQIFFF 106 green anole
XP_004918398  25 LPLFVLFLLIYLMTLVGNLLILLMICTDSHlhtpMYMFLSNLAGLDIFYSTVTSPRMLSDFfsktKTITLpvCITQFFFF 104 western clawed ...
ELR49267      14 TMLFVLFLGIYLLTLMGNLMMILVIRADPHlhtpMYFFLGHLSFLDICHSSITIPKMLQNFlsqrKTLSVwgCITQSFFF 93  Bos mutus
XP_005309316  25 IFLFLVFLAIYLITLLGNMMIMLVIWADHHlhtpMYFFLSNLSFLDICYSSVTVPQMLESFlaekKTISVhgCIAQLFFF 104 western painted...
Feature 1        #  #                                            # #####                         
Q8NH09       105 FVTAGTEACLLSGMAYDRHAAICRPllYGQIMgKQLYMHLVWGSWGLGFLDALINVLLavnMVFCEAKIIHHYsYEMPSL 184 human
XP_003793690 105 FVAAGTEACLLSVMAYDRYAAICHPllYGQIMsKQLYMYLAWGSWALGFLDALINILLavnMVFCGPNLVRSFaCELPPV 184 small-eared galago
EPQ14651     273 IFSGATEACLLSVMAYDRFQAVCHPllYMVAMdKKVCTGLVGASWAIGMGSSLVNTLLlaqQNFCGPNFIHSFvCELPPV 352 Brandt's bat
XP_003772603 111 FFIASSEAFILSAMAYDHYSAICNPliYVIVMsKRFCTFLARGSCLLEVTNSLMNTLPllrLHFCGPHLIHHYsCEMPEL 190 Tasmanian devil
XP_002939873 103 IFFALSEAFVLAVMSYDRYIAICRPlhYMLLMsWKVCVKLVSGVLVFGAVHSLVHTVFltkLTFCRPDVLQSFfCDLPQL 182 western clawed ...
XP_006274670 105 IFFIVAEGLLLSVMAYDRYAAICHPlhYTTIMkQWVHVQLACGAWITAFLYAFPNTLLlmrLHFCGPNIINHFsCEPPQV 184 American alligator
XP_003224583 107 IFMVGTEIFLLSAMAYDRYAAICHPlrYSTIIsRQACSQMVLGAWISGFVDSLVNTLFltgLHFRNRGSINHFsCELPLL 186 green anole
XP_004918398 105 FSFICIELYLLAAMSYDRYVAICHPlhYIQIMhPKFCAMMVSVAWAGGFLTSLIHTLCtlrLTFCGPNLIQGFfCDLPQL 184 western clawed ...
ELR49267      94 IFSGGTESCLLSAMAYDRYAAICHPllYTMIMnGPLCTAMVSAAWVMGFLSSLVNNLCtqnLQFCGPNIISHFsCELPSL 173 Bos mutus
XP_005309316 105 FFLATTECYLLAIMAYDRYTAICEPlnYLKMMsEPVCMWMAGGAWIAGLLNSLVNTLLvtdLHFCGQKEINHFcCELPVL 184 western painted...
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NH09       185 LPLSCSDisrSLIALLCSTLLHGLGNFLLVFLSYTRIISTIlsisstSGRSKAFSTCSAHLTAVTLYYGSGLLRHLMPn- 263 human
XP_003793690 185 LLLACSDphaSIASMLTTMVVLGLSNIILLLGSYSRIITTAlrvnsaAGRSKIFSTCSSHFLVLVIFYGSGCSRYMTPa- 263 small-eared galago
EPQ14651     353 LLLACSDshmSIASILTTVGVLGFGTLVLLLGSYTRIIMTAlrinsaMGRSKIFSTCSSHVLVVTIFYGSGVFRYMTPa- 431 Brandt's bat
XP_003772603 191 LPLSCSDlfpNKMILFTTLVVFGFGCFFPILFSYTRIISAIlkissaSGRSKAFSTCSSHVIVVTLFFLTGLGRHLSPa- 269 Tasmanian devil
XP_002939873 183 LQISCSDtfiNVLLIFCFGTLFGVIILAITFYPYITIIRTVlkipsqNMRSKAFSTCSSHLTVVFIFYGSFFFNYLRPna 262 western clawed ...
XP_006274670 185 FMLSCSDpfaNRMVVYTVGITLGLLAFLITLSSYVNIISTIlkmssvEGKHKAFSTCTSHLIVLILFYGSVMVKYLKPtt 264 American alligator
XP_003224583 187 LQLSCTStfaNEMVILTFSMALGFASLLLIIASYVRIISTVlkiqsaDGRQKAFSTCTSHLMVVLLFCGTAFIRYMRPas 266 green anole
XP_004918398 185 FALSCTNtfvNVLVMFLVGIFMGSGALGITFVPYIHIFRTIkkiktwRGKLKAFSTCASHLTVVFVFYGTLIFTYLRPtp 264 western clawed ...
ELR49267     174 FPLSCSDtmpNTILLAGSTAFLGLVTLPPILFSYSKIILAIlsisssKGQGKAFSTCSSHLTVVLSFYGTALFRYISPs- 252 Bos mutus
XP_005309316 185 LPLSCTDtfiNEMVLFAFTIILGMLSLLLTLISYMFIISTIlripskEGRCKAFSTCTSHLIIVGLFYGTGLISYIRTds 264 western painted...
Feature 1           ## ###  #  ##                     
Q8NH09       264 -SGSPIELIFSVQYTVVTPMLNSLIYSLKNKEVKGER 299 human
XP_003793690 264 -SGSALEQVLSVQYSVVTPMLNPLIYSLKNQEVKTAL 299 small-eared galago
EPQ14651     432 -SGSVLEQVLSMQYSVVTPLLNPLIYSLKNQEVKAAL 467 Brandt's bat
XP_003772603 270 -TGSILEQVISLQYSIVTPLLNPIIYSLKNVEVKIAI 305 Tasmanian devil
XP_002939873 263 kYRFTEDKVASVFYATLTPFLNPLIYSLRNQELQISL 299 western clawed frog
XP_006274670 265 sHSQDRDKFISLAYSIFTPMLNPIIYSLRNQEVKKAV 301 American alligator
XP_003224583 267 sYSETVDKLVSVQYSILTPMLNAIIYSLKNKEVKKAI 303 green anole
XP_004918398 265 rNGFSEDRLVSVVYTVVTPILNPIIYSLRNKDLKEAF 301 western clawed frog
ELR49267     253 -SGSVLERVVSIQYGVITSLINPLIYSFKNQEVKAAL 288 Bos mutus
XP_005309316 265 sYSLTLEKVVSIQYSVLTPMFNPIIYSLKNNEVKSSV 301 western painted turtle

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