Conserved Protein Domain Family
7tmA_TAAR6_8_9

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cd15316: 7tmA_TAAR6_8_9 
trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors
Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320439
Aligned: 4 rows
Threshold Bit Score: 470.881
Created: 20-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                #   #
Q96RI8     33 VILYIVFGFGAVLAVFGNLLVMISILHFKQlhspTNFLVASLACADFLVGVTVMPFSMVRTVesCWYFGrsfCTFHTCCD 112 human
Q96RI9     33 SILYAVLGFGAVLAAFGNLLVMIAILHFKQlhtpTNFLIASLACADFLVGVTVMPFSTVRSVesCWYFGdsyCKFHTCFD 112 human
Q969N4     32 VILYTAFSFGSLLAVFGNLLVMTSVLHFKQlhspTNFLIASLACADFLVGVTVMLFSMVRTVesCWYFGakfCTLHSCCD 111 human
EMP33522   33 VSLYIVLGLLVIFTVGGNLMVVVSIVYFKQlhspTHFLIASLACADFGLGLTVLPFSTVRSVetCWYFGeifCRFHYCLD 112 green seaturtle
Feature 1     #  ##                                                                          #
Q96RI8    113 VAFCYSSLFHLCFISIDRYIAVTDPLVYPTKFtVSVSGICISVSWILPLMYSGAVFYTGVYDDGLEElsdalnCIGGCQT 192 human
Q96RI9    113 TSFCFASLFHLCCISVDRYIAVTDPLTYPTKFtVSVSGICIVLSWFFSVTYSFSIFYTGANEEGIEElvvaltCVGGCQA 192 human
Q969N4    112 VAFCYSSVLHLCFICIDRYIVVTDPLVYATKFtVSVSGICISVSWILPLTYSGAVFYTGVNDDGLEElvsalnCVGGCQI 191 human
EMP33522  113 VSLCQASIFHLCFISVDRYVAVNNPLIYPIKFtVPVSGMFIAVAWIFSLVISFSVVFTGSNDKEMQElvnglsCAGSCQI 192 green seaturtle
Feature 1          #  ##  #                                                                 # 
Q96RI8    193 vVNQNWVLTDFLSFFIPTFIMIILYGNIFLVArrqakkientgsktesssesykarvaRRERKAAKTLGVTVVAFMISWL 272 human
Q96RI9    193 pLNQNWVLLCFLLFFIPNVAMVFIYSKIFLVAkhqarkiestasqaqsssesykervaKRERKAAKTLGIAMAAFLVSWL 272 human
Q969N4    192 iVSQGWVLIDFLLFFIPTLVMIILYSKIFLIAkqqaikiettsskvesssesykirvaKRERKAAKTLGVTVLAFVISWL 271 human
EMP33522  193 iLNKMWVVVSSLLYFIPFFAMIMLYGRIFAVAkqqvrmiemmsnn-tqssnnysdrvgRRERKAAKTLGIPVIAFLVFWS 271 green seaturtle
Feature 1      ##  #              #   #   #                     
Q96RI8    273 PYSIDSLIDafmgfitPACIYEICCWCAYYNSAMNPLIYALFYPWFRKAI 322 human
Q96RI9    273 PYLVDAVIDaymnfitPPYVYEILVWCVYYNSAMNPLIYAFFYQWFGKAI 322 human
Q969N4    272 PYTVDILIDafmgfltPAYIYEICCWSAYYNSAMNPLIYALFYPWFRKAI 321 human
EMP33522  272 PYLIIVTIDaflnfiiPPLIFDIAIWFAYSNSAINPLIYSVFYPWFRKAM 321 green seaturtle

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