Conserved Protein Domain Family
7tmA_Melanopsin

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cd15336: 7tmA_Melanopsin 
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors
Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.
Statistics
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PSSM-Id: 320458
Aligned: 12 rows
Threshold Bit Score: 519.66
Created: 24-Jul-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   #   #
Q9UHM6        71 YTLGTVILLVGLTGMLGNLTVIYTFCRSRSlrtpANMFIINLAVSDFLMSFTQAPVFFTSSLYkqWLFGetgCEFYAFCG 150 human
NP_001038118  31 YTIGTVILIVGITGTLGNFLVIYAFCRSRTlqkpANIFIINLAVSDFLMSITQSPVFFTNSLHkrWIFGekgCELYAFCG 110 chicken
ABD37674       3 YVVGAVILAVGITGMLGNFLVIYAFCRSRSlrspANMFIINLAITDFLMSVTQAPVFFATSLHkrWIFGekgCELYAFCG 82  African clawed ...
ACB29678      61 YIIGSVILLVGVTGMLGNALVIYVFCRSRTlrspSNLLVVNLAAADFLMSLTQSPVFFVASLHhrWVFGelaCELYAFCG 140 Astatotilapia b...
Q2KNE5        76 YTIGAVILTVGITGMLGNFLVIYAFSRSRTlrtpANLFIINLAITDFLMCATQAPIFFTTSMHkrWIFGekgCELYAFCG 155 zebrafish
Q4U4D2        17 YTVGSCVLVIGSIGITGNLLVLYAFYSNKRlrtpANYFIMNLAASDFLMSATQAPICFLNSMHteWILGdigCNFYVFCG 96  Podarcis sicula
CAF99228      19 YTVAFFVLVIGTVGVTGNALVMYAFFCNKKlqtpPNFFIMNLAISDFLMAITQSPIFFINSLYkgWVFGeagCKIYAFCG 98  Tetraodon nigro...
AAC41235      28 YTIGSFILIIGSVGIIGNMLVLYAFYRNKKlrtaPNYFIINLAISDFLMSATQAPVCFLSSLHreWILGdigCNVYAFCG 107 African clawed ...
Q804Q2        19 YVIAFFVLIIGVVGVTGNALVMYAFLCNKKlrtpPNYFIMNLAVSDFLMAITQSPIFFINSLFkeWIFGetgCRMYAFCG 98  Atlantic cod
Q804X9        31 YTVAFFVSVIGTLGVTGNALVQFAFYSNKKlrnlPNYFIMNQAASDFLMAFTQSPFFFINCLNreWIFGelgCKLYAFLG 110 Atlantic cod
Q1JPS6        65 YIIGSVILIVGITGVIGNALVVYVFCRSRTlrtaGNMFIVNLAVADFLMSVTQSPVFFAASLHrrWVFGerpCELYAFCG 144 zebrafish
Q4R1I4        86 YIVGTAVFCIGCCGMFGNAVVVYSFIKSKGlrtpANFFIINLALSDFLMNLTNMPIFAVNSAFqrWLLSdfaCELYGFAG 165 Japanese lancelet
Feature 1        #  ##                                                                ####       
Q9UHM6       151 ALFGISSMITLTAIALDRYLVITRPLatfgvasKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYmsftp 230 human
NP_001038118 111 ALFGITSMITLMVIALDRYFVITKPLasvrvmsKKKALIILVGVWLYSLAWSLPPFFGWSAYVPEGLLTSCSWDYmtftp 190 chicken
ABD37674      83 ALFGITSMITLMVIAVDRYFVITRPLtsigvmsKKRAVLILSGVWLYSLAWSLPPFFGWSAYVPEGLLTSCTWDYmtftp 162 African clawed ...
ACB29678     141 ALFGITSMITLTAIAVDRCLAITRPLamlggvsHQRVLVVVAVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYmsfta 220 Astatotilapia b...
Q2KNE5       156 ALFGICSMITLMVIAVDRYFVITRPLasigvlsQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYmtftp 235 zebrafish
Q4U4D2        97 ALFGITSMMTLLAISVDRYCVITKPLqsikrssKKRSCIIIAFVWLYSLGWSVCPLFGWSSYIPEGLMISCTWDYvsysp 176 Podarcis sicula
CAF99228      99 AWFGIASMINLLTISIDRYIVITKPLqaiqwtsKKRTCIYIALVWLYSLAWSLAPLMGWSSYIPEGLMTSCTWDYmtstp 178 Tetraodon nigro...
AAC41235     108 ALFGITSMMTLLAISINRYIVITKPLqsiqwssKKRTSQIIVLVWMYSLMWSLAPLLGWSSYVPEGLRISCTWDYvtstm 187 African clawed ...
Q804Q2        99 ALFGITSMINLLAISLDRYIVITKPPqairwvsGRRTMVVILLVWLYSLAWSLAPLLGWSSYIPEGLMTSCTWDYvtstp 178 Atlantic cod
Q804X9       111 ALFGITSMINLLAISLDRYMVITRPLeamkwnsKRRTTIAILLVWLYSLAWSLAPLVGWSSYIPEGLRTSCTWDYvtyta 190 Atlantic cod
Q1JPS6       145 ALFGICSMMTLTAIAADRCLAITQPLalvsrvsRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYmtftp 224 zebrafish
Q4R1I4       166 GLFGCLSINTLMAISMDRYLVITKPFlvmrivtKQRVMFAILLLWIWSLVWALPPLFGWSAYVSEGFGTSCTFDYmtpkl 245 Japanese lancelet
Feature 1                ##   #                                                                  
Q9UHM6       231 aVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIretgralqtfgac---kgngeslwqrqrlQSECKMAKIMLLVILLFVL 307 human
NP_001038118 191 sVRAYTMLLFCFVFFIPLIAIIYSYVFIFEAIkkanksvqtfgck---hgnrelqkqyhrmKNEWKLAKIALIVILLYVI 267 chicken
ABD37674     163 sVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIkntnravqkigtd----nnkeshkqyqkmKNEWKMAKIALIVILLYVV 238 African clawed ...
ACB29678     221 aVRTYTLLLFSFVFFIPLAVIAACYFAIFRAVqqagreieqln-------cgevnkayerlRSEWRMAKVALVVILLFIV 293 Astatotilapia b...
Q2KNE5       236 sVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIrttneavgkingd----nkrdsmkrfqrlKNEWKMAKIALIVILMYVI 311 zebrafish
Q4U4D2       177 aNRSYTMMLCCFVFFIPLIIIFHCYLFMFLAIrstgrnvqklgs-----tynrksnvsqsvKSEWKLAKIAFVAIVVFVL 251 Podarcis sicula
CAF99228     179 aNKSYTLMLCCFVFFLPLGIISYCYLCMFLAIrhtsreveklgsq----mrksaiiqqqsiKTEWKLAKIAFVVIIVFVL 254 Tetraodon nigro...
AAC41235     188 sNRSYTMMLCCCVFFIPLIVISHCYLFMFLAIrstgrnvqklgs------ygrqsflsqsmKNEWKMAKIAFVIIIVFVL 261 African clawed ...
Q804Q2       179 aNKGYTLMLCCFVFFIPLGIISYCYLCMFLAIrsagreierlgtq----vrkstlmqqqtiKTEWKLTKVAFVVIIVYVH 254 Atlantic cod
Q804X9       191 sNRSYTMMLCCFVFFIPLAIISYCYLFMFLAIrktsrdverlgiq----vrkstiirqksiRTEWKLAKIAFVVIVVYVL 266 Atlantic cod
Q1JPS6       225 sVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIraagkeireld-------cgethkvyermQNEWKMAKVALVVIVLFII 297 zebrafish
Q4R1I4       246 sYHIFTYIIFFTMYFIPGGVMIYCYYNIFATVksgdkqfgkavkemahedvknkaqqerqrKNEIKTAKIAFIVISLFMS 325 Japanese lancelet
Feature 1         #   #                      #   #                     
Q9UHM6       308 SWAPYSAVALVAFAGyahvlTPYMSSVPAVIAKASAIHNPIIYAITHpKYRVAI 361 human
NP_001038118 268 SWSPYSVVALVAFAGyshvlTPFMNSVPAVIAKASAIHNPIIYAITHpKYRTAI 321 chicken
ABD37674     239 SWSPYSTVALLAFAGyasilTPYMNSVPAVIAKASAIHNPIIYAITHpKYRMAI 292 African clawed frog
ACB29678     294 SWSPYSVVALTATAGyahllTPYMNSVPAVIAKASAIHNPIIYAITHpKYRAAI 347 Astatotilapia burtoni
Q2KNE5       312 SWSPYSTVALTAFAGysdflTPYMNSVPAVIAKASAIHNPIIYAITHpKYRLAI 365 zebrafish
Q4U4D2       252 SWSPYACVTLIAWAGyaktlNPYSKSVPAVIAKASAIYNPIIYAIIHpRYRRTI 305 Podarcis sicula
CAF99228     255 SWSPYACVTLIAWAGygsilDPYSKTVPAVIAKASAIYNPFIYAIIHsKYRDTL 308 Tetraodon nigroviridis
AAC41235     262 SWSPYACVTLIAWAGhgkslTPYSKTVPAVIAKASAIYNPIIYGIIHpKYRETI 315 African clawed frog
Q804Q2       255 SWSPYACVTLIAWAGygshlSPYSKAVPAVIAKASAIYNPFIYAIIHsKYRDTL 308 Atlantic cod
Q804X9       267 SWSPYACVTMISWSGhanilSPYSKTVPAVIAKASTIYNPFIYAIIHqKYRKTL 320 Atlantic cod
Q1JPS6       298 SWSPYSVVALTATAGyshflTPYMNSVPAVIAKASAIHNPIIYAITHpKYRVAI 351 zebrafish
Q4R1I4       326 AWTPYAVVSALGTLGyqdlvTPYLQSIPAMFAKSSAVYSPIVYAITYpKFREAV 379 Japanese lancelet

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