Conserved Protein Domain Family
7tmA_S1PR4_Edg6

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cd15349: 7tmA_S1PR4_Edg6 
sphingosine-1-phosphate receptor subtype 4 (S1PR4 or S1P4), also called endothelial differentiation gene 6 (Edg6), member of the class A family of seven-transmembrane G protein-coupled receptors
The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).
Statistics
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PSSM-Id: 320471
Aligned: 4 rows
Threshold Bit Score: 380.669
Created: 25-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to the S1P1 receptor in complex with the selective antagonist ML56.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #                  ##  #
O95977        47 GALRGLSVAASCLVVLENLLVLAAITSHMRs-rRWVYYCLVNITLSDLLTGAAYLANVLLSgARTFRLApaqWFLREGLL 125 Western lowland...
AAH56518      99 SAVTVLFLCFSVFIILENLMVLLAVLFRVRlrhRWIFICIANIALSDLLTGTSYVVNICMSgEQTFRLTpilWLFREGLL 178 zebrafish
EMP24201       2 GLLKVAFITISCLIVVENLLVLMAIVRGLHv-rRWVYSCIASITVSDLLAGVAYICNICLSgSRTFQLTpelWFLREGVL 80  green seaturtle
XP_002936376  41 GIFHLLGILISVLIILENLSVLLALLRDPRm-rRWVHCCLGNIALSDLLAGISYLLNLFLSgPTTFRLSpalWFLREGLL 119 western clawed ...
Feature 1        #  #                                                                            
O95977       126 FTALAASTFSLLFTAGERFATMVRPvaeSGATKTSRVYGFIGLCWLLAALLGMLPllGWNCLCafdrCSSLLPLYSKRYI 205 Western lowland...
AAH56518     179 FVALAASIFSLLLIAVERYATMMKPvhqKTATKTYRVYIMMLLCWITAFIIGFLPlmGWNCVCdlrsCSTLLPLYSKSYI 258 zebrafish
EMP24201      81 FIALAASTFSLLVTAIERYSTMVRPiaeNEASKTKRLRSLIVSCWALAILIGMLPllGWNCLCdfrsCSTLLPLYSKNYI 160 green seaturtle
XP_002936376 120 FTTLAASTFSLLVTAVERYCTMVILvteNNSVKSMRVQGVIVLCWVLAGVVGFLPllGWNCLCkiesCSSLLPLYSRTYL 199 western clawed ...
Feature 1          #                                                       #      #              
O95977       206 LFCLVIFAGVLATIMGLYGAIFRLvqasgqkaprpaaRRKARRLLKTVLMILLAFLVCWGPLFGLLLADVFgsnlwaqeY 285 Western lowland...
AAH56518     259 LFALVIFFIILLTIGVLYFAIYCHvrsste-tisarsRKRSLRLLKAVISIVGVFMVCWGPLFILLLVDFFcysr-scsP 336 zebrafish
EMP24201     161 LFCVVMFSMILLGIIGLYASIYHLvrassqqvitrhsRKRSLRLLKTVLMILGAFILCWSPLFALLLLDVFcesq-tckL 239 green seaturtle
XP_002936376 200 FFSIILLGVTLLGIIAAYCTIYYLvctsgrrvaetnsSRRSFHLLKTVLIILSAFVICWSPLFFFLIVDFTcspp-sckS 278 western clawed ...
Feature 1            #  #                         
O95977       286 LRGMDWILALAVLNSAVNPIIYSFRSrEVCRAV 318 Western lowland gorilla
AAH56518     337 LFNPEWVIALAVLNSAMNPLIYSFGSlELRKAI 369 zebrafish
EMP24201     240 LKGMDWALALALLNSAINPLIYSFRSlEVRRAV 272 green seaturtle
XP_002936376 279 PLGLEWVLAVAVLNSAINPLIYSFRSsEMRRAV 311 western clawed frog

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