3KHQ,3KG5


Conserved Protein Domain Family
IgV_CD79b_beta

?
cd16096: IgV_CD79b_beta 
Immunoglobulin variable domain (IgV) Cluster of Differentiation (CD) 79B
The members here are composed of the immunoglobulin variable domain (IgV) of the Cluster of Differentiation (CD) 79B (also known as CD79b molecule, immunoglobulin-associated beta (Ig-beta), and B29). The B lymphocyte antigen receptor is a multimeric complex that includes the antigen-specific component, surface immunoglobulin (Ig). Surface Ig non-covalently associates with two other proteins, Ig-alpha and Ig-beta, which are necessary for expression and function of the B-cell antigen receptor. This gene encodes the Ig-beta protein of the B-cell antigen component. Alternatively spliced transcript variants encoding different isoforms have been described. Members of the IgV family are components of immunoglobulin (Ig) and T cell receptors. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. Within the variable domain, there are regions of even more variability called the hypervariable or complementarity-determining regions (CDRs) which are responsible for antigen binding. A predominant feature of most Ig domains is the disulfide bridge connecting 2 beta-sheets with a tryptophan residue packed against the disulfide bond. Members of this group contain standard Ig superfamily V-set AGFCC'C"/DEB domain topology.
Statistics
?
PSSM-Id: 409515
Aligned: 5 rows
Threshold Bit Score: 176.296
Created: 2-May-2015
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          #                           #                                       #      
3KHQ_A     20 IWQHPRFAAKKRSSMVKFHCYTnh-sGALTWFRKR-GSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQK 97  house mouse
3KG5_A     21 IWQSPRFIARKRGFTVKMHCYMnsasGNVSWLWKQeMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQK 100 human
NP_032365  46 IWQHPRFAAKKRSSMVKFHCYTnh-sGALTWFRKR-GSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQK 123 house mouse
NP_598217  46 IWQHPRFAAKKRSSMVKFHCHTdy-sGVMTWFRQK-GNQRPQELFPEDGHISQTRNGSVYTLTLQNIQYEDNGIYFCQQK 123 Norway rat
EDM06394  107 IWQHPRFAAKKRSSMVKFHCHTdy-sGVMTWFRQK-GNQRPQELFPEDGHISQTRNGSVYTLTLQNIQYEDNGIYFCQQK 184 Norway rat
Feature 1           #### ## #   
3KHQ_A     98 CDSANhNVTDSCGTELLV 115 house mouse
3KG5_A    101 CNNTS-EVYQGCGTELRV 117 human
NP_032365 124 CDSANhNVTDSCGTELLV 141 house mouse
NP_598217 124 CNSTEpDVTDGCGTELLV 141 Norway rat
EDM06394  185 CNSTEpDVTDGCGTELLV 202 Norway rat

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap