3BK5,4Z48,3BUU


Conserved Protein Domain Family
LolA_like

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cd16329: LolA_like 
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proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB
This family contains uncharacterized proteins similar to the periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB, all of which have similar unclosed beta-barrel structures that resemble a baseball glove-like scaffold consisting of an 11-stranded antiparallel sheet. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts outer membrane (OM)-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. It is proposed that the LolA/LolB complex forms a tunnel-like structure, where the hydrophobic insides of LolA and LolB are connected, which enables lipoproteins to transfer from LolA to LolB. RseB exerts a crucial role in modulating the stability of RseA, the transmembrane anti-sigma-factor that is degraded during sigma-E-dependent transcription caused by bacterial envelope stress. Its structural similarity to LolA and LolB suggests that RseA may act as a sensor of periplasmic stress with a dual functionality, detecting mislocalized lipoproteins as well as propagating the signal to induce the sigma-E-response.
Statistics
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PSSM-Id: 319986
Aligned: 673 rows
Threshold Bit Score: 70.807
Created: 8-Oct-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
hydrophobic
Conserved site includes 23 residues -Click on image for an interactive view with Cn3D
Feature 1:hydrophobic core
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                             # #        # #           #       # #                     # 
3BK5_A         5 KGLEIAQERKARdeg-wgDSIATX-------EXILKNa--qGESSTR------LXRLKSLEve--------gdGDKGLTI 60  Vibrio parahaem...
WP_006977697  30 SASQLASQLSALr----qDGSSYVr-----lRMEIKG----GKAETL------QLQIKQRLtr---------gSSEVMYQ 81  Chthoniobacter ...
ACD83948      14 LSCFLWSKPNPDk----pSPPLEFiqgrfwrNFRLKDyilkGSIQAAkdtypiTLILHDRSmeyh-----fmgLPLQIHV 84  Methylacidiphil...
WP_050028785  27 GAAELAAKLSDLq----qDGSTFIr-----vKMIVSSpanpSDPKTTl-----QLQIKSRRsa---------gQTDVVYQ 83  Verrucomicrobiu...
WP_015326030  26 SAQSLLQDIIKQm-----DQVKDF-------KGTIVT----KVTSAD------KVYNFKTK------------VMKSRTR 71  Halobacteroides...
ADW70838      25 AAIAIARQRVEAt-----DSRASG-------HLVRVNa--nGKRVSNa----fTLEAHWFPg-----------VLRALIE 75  Granulicella tu...
WP_020494170  25 LASVLWMSGFSRsafaapDPAKPCp------PLEFLQgrfwKNFRLQdfalhgVIESERESypiq----lilhDRKMIYD 94  Verrucomicrobiu...
AIE88123       5 TAVAVLALTQGA------QNIQSFv------QPDLKDat-fVARKVKad--qrELRKINDSfgn------syrFDTTTIY 63  Fimbriimonas gi...
WP_013279026  29 SPDRIIKGILANf-----DQIKDF-------KGSLVSkiflAEETVT------YRTNIMKN------------QQRSLTD 78  Acetohalobium a...
KPJ87226       5 VRHVIVTAALTAl-----CSPAAIa-----qDLSLDEi--lNNHYAAlgg-ldNIRSITSRrmvgrmtlpqgmEATFTLL 71  Gemmatimonas sp...
Feature 1        #                # #                # #                                         
3BK5_A        61 FDQPr--------DVTGTAFLNHShti---gaDDQWLYLPa-lKRVKRIss----rnKSGPFx--gSEFAYEDLs-sFEI 121 Vibrio parahaem...
WP_006977697  82 VLFPk--------ERKGESVLLKRsak---ggASGASFTPp--NSMRQIsd-----lKEPLFg---SDLSYEDVi--DNF 138 Chthoniobacter ...
ACD83948      85 EINP---------DNTYVAYKNHP--------SDPWQPITg-fNRTKHIl------nTDISY----EDLCLDFIr-wDKI 135 Methylacidiphil...
WP_050028785  84 VLFPk--------ERKGEAVLISSs-------GNGATFTPp--DKLQTFda----akFKESLl--gSDLSYEDVs--DNF 138 Verrucomicrobiu...
WP_015326030  72 LMTQ---------HIKGSKFSASAgrl---lnTIPLLYLP---PDYSTIm-------TTLPIe---GQLDYQNPl--QNL 124 Halobacteroides...
ADW70838      76 IVPPrtpaenanqDARVSILLEMRpn----gqNTIQIFRPh--ESAPALlpf--dkwSESVFg---SDFNYEDF---LQP 141 Granulicella tu...
WP_020494170  95 FLNPpfq---irvEIQPERSLVERr------rQKRDPWQP---VSGRSR--------QSPILd---TDITYEDLc--LDF 149 Verrucomicrobiu...
AIE88123      64 FKEPf--------KVRLEASVEDT--------TVVYVLNGp--IQTIKMrsfhqrldLTGKPgrrqTPLDFGLLt-pSLF 124 Fimbriimonas gi...
WP_013279026  79 NSYTf-------gRIKGTASGRLLn-------AMPWIYLP---PDYSLLq-------NALPLr---GQRDYLEPl--NNL 129 Acetohalobium a...
KPJ87226      72 SKRPm--------KARMEFTLQGMtgvqaydgETAWMLMPfmgQTEPEI--------MPPDM----ADPMKEEAdfdGPL 131 Gemmatimonas sp...
Feature 1                                                                #             # #       
3BK5_A       122 EKY-----RFNHLKDekfngqdvFVLEQIPtd---knSGYTKQVVWLDKAhyrPLKVEFYDr-kGALLKTLTFANYkqy- 191 Vibrio parahaem...
WP_006977697 139 YGWp----QQAIVGTeevegvncQVLESKPgkg--drSSYGSVKSWVDMRrmvPLRVEKYSe-sGKLVHRIDTTRVvsd- 210 Chthoniobacter ...
ACD83948     136 KPLgt--dSIKTLSC--------WAFEAYPgp---vpSAYAKVRYWIAEDyyaLLRVEGYNa-gGQIVKRLDINSVqri- 200 Methylacidiphil...
WP_050028785 139 FAWk----DQSLAGTetvsnvscQILESKPkg---arSSYTSVKSWIDTKrmvPLRVEKYGa-gGQLVRRIDTSDVanv- 209 Verrucomicrobiu...
WP_015326030 125 DKLy----KIKLLGE--------AIYQNREvyilqleNLFSTQRIYIDKErslITKIKVFN---SSNIKVADISYTdfel 189 Halobacteroides...
ADW70838     142 EFYw---qNQTILRSdkfgvhdcDVLKSVPegs--nrSHYVEVQTWLDHNinyPVYVEKTPk-dAAGVKEFTYSGLtqs- 214 Granulicella tu...
WP_020494170 150 MRWd----NVRPLGTdhvktltaWAFDAVPpp---etSAYARVRYWIAAEyyaLLRADGYNk-aGALIKRLEVNGVqri- 220 Verrucomicrobiu...
AIE88123     125 EGLf----QARFVRNdra--tgdVVFDLTYpe---rlDDTSRHRIWIDPQkkyVTKREWYNq-sGRQLATFIYENPkne- 193 Fimbriimonas gi...
WP_013279026 130 EDIy----NLKLLGE--------TNLHNKPitllelsNQFTRQVIWVEKErllIDKIEVFNg-aDQLVATINYNGYrev- 195 Acetohalobium a...
KPJ87226     132 VDYaekghKLALLGMedvegaqtYKLELTH-------KNGEITIFYLDADyflPIKSESERtmqGMEMHVETVLSDyke- 203 Gemmatimonas sp...
Feature 1               #  # #             # # #      #               
3BK5_A       192 -ldkYWRAHTXAXTNHq-----tGKSTELNTs----DLRFqt---gLEENDFN 231 Vibrio parahaemolyticus RIMD 2210633
WP_006977697 211 --agHSIPANLSVRGPh-----eNSTTLLDGsrirhDVNFtd--adLSAEGMK 254 Chthoniobacter flavus
ACD83948     201 --gdAYVIKEMQIATIppgktlsSSKTYIQIee-gkPLSPk----eSENLDFS 246 Methylacidiphilum infernorum V4
WP_050028785 210 --dgRNVLAMLVIRRP-------GHATATEMdg--sRIKRgv---aYTDADFT 248 Verrucomicrobium sp. BvORR034
WP_015326030 190 fasqVWLPTKIKVDTLf-----nNSRLEIEYqd--wKVNLg-----LTSFDFA 230 Halobacteroides halobius
ADW70838     215 --ggVWAARQVGVKVRg-----rPGLTLLLIeh--gSTRAn-----LNIRDFS 253 Granulicella tundricola MP5ACTX9
WP_020494170 221 --gdAYVIKEMQVSSFdpk--keGSSRTFINi----RRGEp-----LSPEAGP 260 Verrucomicrobium sp. 3C
AIE88123     194 --ggVWMPTRMTVKNVdn---rvAGITTYDSi----KTNTg-----LSDSMFQ 232 Fimbriimonas ginsengisoli Gsoil 348
WP_013279026 196 -eneIWLPNLIIVENR-------NEEQILKI-----NYQNwvindgLDNEDFA 235 Acetohalobium arabaticum
KPJ87226     204 -vdgMMIPHSLQILQGp------GSQTLTIE-----KVEHnv---eLDDAQFS 241 Gemmatimonas sp. SG8_17

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