3DPL,2LGV,1LDJ,1U6G,4A0C,4P5O,3DQV,5N4W,6TTU,6R6H,6R7I


Conserved Protein Domain Family
mRING-H2-C3H2C2D_RBX1

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cd16485: mRING-H2-C3H2C2D_RBX1 
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modified RING finger, H2 subclass (C3H2C2D-type), found in RING-box protein 1 (RBX1) and similar proteins
RBX1, also known as Hrt1, protein ZYP, RING finger protein 75 (RNF75), or regulator of cullins 1 (ROC1), is an E3 ubiquitin-protein ligase necessary for ubiquitin ligation activity of multimeric cullin (Cul)-RING E3 ligases (CRLs). RBX1-containing CRLs are involved in the NEDD8 pathway; RBX1 specifically regulates NEDD8ylation of Cul1-4. It can also bind and activate HIV-1 Vif-Cullin5 E3 ligase complex in vitro. Moreover, RBX1 is an essential element of Skp1/Cullin/F-box (SCF) E3-ubiquitin ligase complexes that target diverse proteins for proteasome-mediated degradation. It is a direct functional target of miR-194 and plays an important role in proliferation and migration of gastric cancer (GC) cells. RBX1 is also an essential component of KEAP1/CUL3/RBX1 E3-ubiquitin ligase complex that functions as a regulator of NFE2-related factor 2 (NRF2) and plays a key role in NRF2 pathway deregulation in multiple tumor types, including ovarian carcinomas (OVCA) and papillary thyroid carcinoma (PTC). Furthermore, RBX1 associates with DDB1, Cul4A, and Fbxw5 to form the Fbxw5-DDB1-Cul4A-Rbx1 complex that may function as a dual SUMO/ubiquitin ligase suppressing c-Myb activity through sumoylation or ubiquitination. RBX1 contains a C-terminal modified RING-H2 finger that is of C3H2C2D-type, rather than the canonical C3H2C3-type. The modified RING-H2 finger is essential for its ligase activity.
Statistics
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PSSM-Id: 438148
Aligned: 55 rows
Threshold Bit Score: 106.719
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C DClick to see conserved feature residue pattern help
Evidence:
  • Structure:2LGV; Homo sapiens RBX1 binds two Zn2+ ions through its modified RING-H2 finger.
    View structure with Cn3D
  • Comment:modified RING-H2 finger (C3H2C2D-type)
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #                                     # #  #  #          #  #    
3DPL_R     38 DNCAICRNHIMDLCIECQAnqas--------atseECTVAWGVCNHAFHFHCISRWLKTRqvCPLDNREW 99  human
2LGV_A     32 DNCAICRNHIMDLCIECQAnqas--------atseECTVAWGVCNHAFHFHCISRWLKTRqvCPLDNREW 93  human
CUG54892   71 DTCAICRNHIMDLCIECQAnqqs--------gpaeECTVAWGTCNHAFHFHCISRWLKTRqvCPLDNKEW 132 Bodo saltans
Q38C61     39 DTCAICRNHVMDLCIECQAssng---------prtNCNIAWGVCNHAFHTHCISRWLKTRnvCPLDNKEW 99  Trypanosoma brucei
Q9NHX0     55 DNCAICRNHIMNLCIECQAdpna---------nqdECTVAWGECNHAFHYHCIARWLKTRlvCPLDNKEW 115 fruit fly
CAB11123   31 DNCAICRNHIMDLCIECQAkttdhendkdkkidkeGCTVAWGVCNHAFHLHCISRWIKARqvCPLDNTTW 100 Plasmodium falciparum 3D7
Q9M2B0     47 DNCAICRNHIMDLCIECLAnqas--------atseECTVAWGVCNHAFHFHCISRWLKTRqvCPLDVCEW 108 thale cress
CEP03751   48 DTCAICRNLIMELCIECQAdqrs--------essgDCTVAWGVCNHAFHFHCISRWLANRgvCPLDNRDW 109 Plasmodiophora brassicae
Q08273     53 DNCAICRNHIMEPCIECQPkamt--------dtdnECVAAWGVCNHAFHLHCINKWIKTRdaCPLDNQPW 114 Saccharomyces cerevisiae S288c
CAK91442   27 DNCAICKNHIMEKCIECDAqeg-----------qgECIVAWGTCNHAYHFHCIERWLKNRqtCPLDNRNW 85  Paramecium tetraurelia

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