Conserved Protein Domain Family
RING-HC_RNF212-like

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cd16560: RING-HC_RNF212-like 
RING finger, HC subclass, found in RING finger proteins RNF212, RNF212B and similar proteins
This subfamily includes RING finger protein RNF212, RNF212B, and their homologs. RNF212 is a dosage-sensitive regulator of crossing-over during mammalian meiosis. It plays a central role in designating crossover sites and coupling chromosome synapsis to the formation of crossover-specific recombination complexes. It also functions as an E3 ligase for small ubiquitin-related modifier (SUMO) modification. RNF212B shows high sequence similarity with RNF212, but its biological function remains unclear. Members of this subfamily contain an N-terminal C3HC4-type RING-HC finger. Also included are two homologs of RNF212, meiotic procrossover factors Zip3 and ZHP-3, which have been identified in Saccharomyces cerevisiae and Caenorhabditis elegans, respectively. Budding yeast Zip3 is a small ubiquitin-related modifier (SUMO) E3 ligase implicated in the SUMO pathway of post-translational modification. It sumoylates chromosome axis proteins, thus promoting synaptonemal complex polymerization. It also acts as an Smt3 E3 ligase. Zip3 includes a SUMO Interacting Motif (SIM) and a modified C3HCHC2-type RING-HC finger that are important for Zip3 in vitro E3 ligase activity and necessary for SC polymerization and correct sporulation. ZHP-3 acts at crossovers to couple meiotic recombination with synaptonemal complex disassembly and chiasma formation in Caenorhabditis elegans. It possesses a C3HC4-type RING-HC finger.
Statistics
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PSSM-Id: 438222
Aligned: 5 rows
Threshold Bit Score: 66.024
Created: 24-Mar-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #               # #  #  #        #  # 
Q495C1         5 VFCNRCFQPphr-tscFSLTNCGHVYCDACLGKgkknECLICK 46  human
A8MTL3         4 FHCNQCFRKdg---ahFFVTSCGHIFCKKCVTLe---KCAVCG 40  human
XP_006816460   5 VHCNTCFHQpgd-grkFFLTNCGHMYCETCVKEgtrnKCMMCG 46  Saccoglossus kowalevskii
KFM65302       4 IHCNNCFQLpds-aknFVLTSCGHIYCCDCEEKcareLCKLCG 45  Stegodyphus mimosarum
XP_012561882   4 VHCNTCFVLasdgkskFHLTSCGHIFCNECISKdeekKCKTCG 46  Hydra vulgaris

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