Conserved Protein Domain Family
RING-HC_MEX3A

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cd16720: RING-HC_MEX3A 
RING finger, HC subclass, found in RNA-binding protein MEX3A
MEX3A, also known as RING finger and KH domain-containing protein 4 (RKHD4), is an RNA-binding phosphoprotein that localizes in P-bodies and stress granules, which are two structures involved in the storage and turnover of mRNAs. It has been implicated in the regulation of tumorigenesis. It controls the polarity and stemness of intestinal epithelial cells through the post-transcriptional regulation of the homeobox transcription factor CDX2, which plays a crucial role in intestinal cell fate specification, both during normal development and in tumorigenic processes involving intestinal reprogramming. Moreover, it exhibits a transforming activity when overexpressed in gastric epithelial cells. MEX3A contains two K homology (KH) domains that provide RNA-binding capacity, and a C-terminal C3HC4-type RING-HC finger. Like other MEX-3 family proteins, MEX3A shuttles between the nucleus and the cytoplasm via the CRM1-dependent export pathway.
Statistics
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PSSM-Id: 438380
Aligned: 5 rows
Threshold Bit Score: 118.522
Created: 20-Mar-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structure of Homo sapiens MEX3C with bound Zn2+ ions through its RING-HC finger
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #           # #   #  #           #  #            
A1L020       465 GGRDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS 520 Homo sapiens
XP_006000340 420 GGRDCVVCFESEVTAAMVPCGHNLFCMECAIRICEREEPKCPVCHAPITQAIRIFS 475 coelacanth
CDQ69664     461 ILRDCMTCFESKVTAALVPCGHNLFCMECAIRICELNHPECPVCHTLVSQAIRIFS 516 rainbow trout
AAI30196     335 GSRECMVCFESEVTAALVPCGHNLFCMECAVRICERNEPECPVCHSSATQAIRIFS 390 African clawed frog
XP_015153825 471 SSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS 526 chicken

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