Conserved Protein Domain Family
RING-HC_RNF5

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cd16743: RING-HC_RNF5 
RING finger, HC subclass, found in RING finger protein 5 (RNF5) and similar proteins
RNF5, also known as protein G16 or Ram1, is an E3 ubiquitin-protein ligase anchored to the outer membrane of the endoplasmic reticulum (ER). It acts at early stages of cystic fibrosis (CF) transmembrane conductance regulator (CFTR) biosynthesis and functions as a target for therapeutic modalities to antagonize mutant CFTR proteins in CF patients carrying the F508del allele. It also regulates the turnover of specific G protein-coupled receptors by ubiquitinating JNK-associated membrane protein (JAMP) and preventing proteasome recruitment. RNF5 limits basal levels of autophagy and influences susceptibility to bacterial infection through the regulation of ATG4B stability. It is also involved in the degradation of Pendrin, a transmembrane chloride/anion exchanger highly expressed in thyroid, kidney, and inner ear. RNF5 plays an important role in cell adhesion and migration. It can modulate cell migration by ubiquitinating paxillin. Furthermore, RNF5 interacts with virus-induced signaling adaptor (VISA) at mitochondria in a viral infection-dependent manner, and further targets VISA at K362 and K461 for K48-linked ubiquitination and degradation after viral infection. It also negatively regulates virus-triggered signaling by targeting MITA, also known as STING, for ubiquitination and degradation at the mitochondria. In addition, RNF5 determines breast cancer response to ER stress-inducing chemotherapies through the regulation of the L-glutamine carrier proteins SLC1A5 and SLC38A2 (SLC1A5/38A2). It also has been implicated in muscle organization and in recognition and processing of misfolded proteins. RNF5 contains a C3HC4-type RING-HC finger.
Statistics
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PSSM-Id: 438401
Aligned: 7 rows
Threshold Bit Score: 121.531
Created: 26-Jul-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #           # #  #  #             #  #           
Q99942        25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVP 78  human
NP_001092153  12 YECNICLETAREPVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGVSREKVIP 65  African clawed frog
CBY09225      24 YQCNVCLDTAKDPVVSLCGHLFCWPCIHQWIETRPQKQECPVCKAGIGKDKMVP 77  Oikopleura dioica
XP_007430367  25 FECNICLEPAREAVIGLCGHLYCWPCLHQWLETRPERQECPVCKAGISRDKVIP 78  Burmese python
XP_007909346  23 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPDRQECPVCKAGISREKVIP 76  elephant shark
XP_006013435   7 FECNICLETARDAVISLCGHLFCWPCLHRWLETRPDRQECPVCKAGISRDKVIP 60  coelacanth
XP_013090742  27 YECNICLETANDPVVSMCGHLFCWPCLHQWLETRPNRQTCPVCKAGISKDKVIP 80  Biomphalaria glabrata

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